Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNA5SP367-201ENST00000516557 118 ntBASIC3.34□□□□□ -1.87
THBS1P07996 RNA5SP395-201ENST00000516567 118 ntBASIC3.34□□□□□ -1.87
THBS1P07996 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.34□□□□□ -1.87
THBS1P07996 MIR4474-201ENST00000579189 78 ntBASIC3.34□□□□□ -1.87
THBS1P07996 MIR4762-201ENST00000585261 75 ntBASIC3.34□□□□□ -1.87
THBS1P07996 AL353149.1-201ENST00000610667 244 ntBASIC3.34□□□□□ -1.87
THBS1P07996 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
THBS1P07996 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
THBS1P07996 FAM35CP-201ENST00000554755 2470 ntBASIC3.34□□□□□ -1.88
THBS1P07996 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.88
THBS1P07996 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.34□□□□□ -1.88
THBS1P07996 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
THBS1P07996 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
THBS1P07996 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
THBS1P07996 AC008264.2-201ENST00000610193 3731 ntBASIC3.33□□□□□ -1.88
THBS1P07996 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.33□□□□□ -1.88
THBS1P07996 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
THBS1P07996 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
THBS1P07996 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
THBS1P07996 RNU6-1084P-201ENST00000362498 107 ntBASIC3.33□□□□□ -1.88
THBS1P07996 SNORA33-201ENST00000363664 130 ntBASIC3.33□□□□□ -1.88
THBS1P07996 RNU6-1276P-201ENST00000365372 104 ntBASIC3.33□□□□□ -1.88
THBS1P07996 SNORA5A-201ENST00000384111 134 ntBASIC3.33□□□□□ -1.88
THBS1P07996 Y_RNA.547-201ENST00000384654 119 ntBASIC3.33□□□□□ -1.88
THBS1P07996 AC004941.2-201ENST00000427009 228 ntBASIC3.33□□□□□ -1.88
THBS1P07996 AL035398.1-201ENST00000430869 322 ntBASIC3.33□□□□□ -1.88
THBS1P07996 CKS1BP2-201ENST00000497342 240 ntBASIC3.33□□□□□ -1.88
THBS1P07996 AC091826.1-201ENST00000514065 313 ntBASIC3.33□□□□□ -1.88
THBS1P07996 RNU2-13P-201ENST00000515909 113 ntBASIC3.33□□□□□ -1.88
THBS1P07996 AC022523.2-201ENST00000561045 150 ntBASIC3.33□□□□□ -1.88
THBS1P07996 RNVU1-4-201ENST00000612985 164 ntBASIC3.33□□□□□ -1.88
THBS1P07996 AC009093.8-201ENST00000641769 292 ntBASIC3.33□□□□□ -1.88
THBS1P07996 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
THBS1P07996 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
THBS1P07996 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
THBS1P07996 U8.5-201ENST00000364528 136 ntBASIC3.32□□□□□ -1.88
THBS1P07996 AL451046.2-201ENST00000403074 277 ntBASIC3.32□□□□□ -1.88
THBS1P07996 MIR1255A-201ENST00000408338 113 ntBASIC3.32□□□□□ -1.88
THBS1P07996 RNA5SP225-201ENST00000410874 135 ntBASIC3.32□□□□□ -1.88
THBS1P07996 AP003484.1-201ENST00000530974 250 ntBASIC3.32□□□□□ -1.88
THBS1P07996 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.32□□□□□ -1.88
THBS1P07996 AC091932.4-201ENST00000623386 200 ntBASIC3.32□□□□□ -1.88
THBS1P07996 AP003355.3-201ENST00000623465 114 ntBASIC3.32□□□□□ -1.88
THBS1P07996 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS1P07996 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
THBS1P07996 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS1P07996 SNORD115-19-201ENST00000363098 82 ntBASIC3.31□□□□□ -1.88
THBS1P07996 SNORD115-18-201ENST00000363293 82 ntBASIC3.31□□□□□ -1.88
THBS1P07996 Y_RNA.155-201ENST00000363632 101 ntBASIC3.31□□□□□ -1.88
THBS1P07996 RNU6-268P-201ENST00000364174 107 ntBASIC3.31□□□□□ -1.88
THBS1P07996 RNA5SP387-201ENST00000364226 106 ntBASIC3.31□□□□□ -1.88
THBS1P07996 SNORD115-17-201ENST00000364612 82 ntBASIC3.31□□□□□ -1.88
THBS1P07996 RNU6-1296P-201ENST00000383879 107 ntBASIC3.31□□□□□ -1.88
THBS1P07996 Y_RNA.531-201ENST00000384589 121 ntBASIC3.31□□□□□ -1.88
THBS1P07996 MIR7-3-201ENST00000384898 110 ntBASIC3.31□□□□□ -1.88
THBS1P07996 RNA5SP323-201ENST00000391094 133 ntBASIC3.31□□□□□ -1.88
THBS1P07996 SNORA11.1-201ENST00000408133 129 ntBASIC3.31□□□□□ -1.88
THBS1P07996 RNU6-733P-201ENST00000410759 104 ntBASIC3.31□□□□□ -1.88
THBS1P07996 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.31□□□□□ -1.88
THBS1P07996 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
THBS1P07996 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.31□□□□□ -1.88
THBS1P07996 RNU7-61P-201ENST00000515897 61 ntBASIC3.31□□□□□ -1.88
THBS1P07996 SCARNA17.1-201ENST00000516211 143 ntBASIC3.31□□□□□ -1.88
THBS1P07996 SCARNA17.2-201ENST00000516334 143 ntBASIC3.31□□□□□ -1.88
THBS1P07996 SNORD36C-201ENST00000516733 66 ntBASIC3.31□□□□□ -1.88
THBS1P07996 SCARNA3-201ENST00000517097 143 ntBASIC3.31□□□□□ -1.88
THBS1P07996 AC024995.1-201ENST00000523014 93 ntBASIC3.31□□□□□ -1.88
THBS1P07996 AC078899.2-201ENST00000595282 212 ntBASIC3.31□□□□□ -1.88
THBS1P07996 SCARNA17.4-201ENST00000614296 143 ntBASIC3.31□□□□□ -1.88
THBS1P07996 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
THBS1P07996 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
THBS1P07996 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS1P07996 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS1P07996 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.31□□□□□ -1.88
THBS1P07996 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS1P07996 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
THBS1P07996 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
THBS1P07996 AC091564.4-201ENST00000533934 2194 ntBASIC3.3□□□□□ -1.88
THBS1P07996 SNORA1B-201ENST00000362535 133 ntBASIC3.3□□□□□ -1.88
THBS1P07996 RNU6-363P-201ENST00000362895 105 ntBASIC3.3□□□□□ -1.88
THBS1P07996 SNORD68-201ENST00000363214 84 ntBASIC3.3□□□□□ -1.88
THBS1P07996 RNU6-743P-201ENST00000364151 106 ntBASIC3.3□□□□□ -1.88
THBS1P07996 Y_RNA.299-201ENST00000364973 94 ntBASIC3.3□□□□□ -1.88
THBS1P07996 RNU6-409P-201ENST00000384114 104 ntBASIC3.3□□□□□ -1.88
THBS1P07996 SNORA9-201ENST00000384215 133 ntBASIC3.3□□□□□ -1.88
THBS1P07996 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
THBS1P07996 MRPL35P3-201ENST00000421557 364 ntBASIC3.3□□□□□ -1.88
THBS1P07996 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.3□□□□□ -1.88
THBS1P07996 RNU6-991P-201ENST00000516168 107 ntBASIC3.3□□□□□ -1.88
THBS1P07996 RNU2-35P-201ENST00000516446 142 ntBASIC3.3□□□□□ -1.88
THBS1P07996 UCA1.1-201ENST00000620952 75 ntBASIC3.3□□□□□ -1.88
THBS1P07996 MIR338-201ENST00000636369 67 ntBASIC3.3□□□□□ -1.88
THBS1P07996 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.3□□□□□ -1.88
THBS1P07996 PWAR6-201ENST00000552334 4618 ntBASIC3.3□□□□□ -1.88
THBS1P07996 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
THBS1P07996 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
THBS1P07996 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
THBS1P07996 GABRG2-229ENST00000641017 3628 ntBASIC3.3□□□□□ -1.88
THBS1P07996 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
THBS1P07996 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms