Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC127459.3-201ENST00000624328 466 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 AL356292.1-201ENST00000283110 373 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 SNORD114-7-201ENST00000362520 77 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-136P-201ENST00000384663 107 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-855P-201ENST00000410395 104 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 RNU2-7P-201ENST00000410794 178 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 EBAG9P1-201ENST00000418955 543 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 AL445646.1-201ENST00000431784 216 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 AC097462.1-201ENST00000514125 324 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 RNU7-99P-201ENST00000516271 62 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 SCARNA24.2-201ENST00000516968 130 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 AC092881.1-201ENST00000638218 2733 ntBASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN16Q9Y5I7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 SNORA25.1-201ENST00000362326 128 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.16-201ENST00000362421 102 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU4-80P-201ENST00000363200 141 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU1-22P-201ENST00000363334 158 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-196P-201ENST00000384315 107 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-1248P-201ENST00000391096 64 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-1203P-201ENST00000410703 110 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 OOSP1P1-201ENST00000423265 274 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 AL163195.1-201ENST00000496941 348 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-1337P-201ENST00000516525 95 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-63P-201ENST00000516690 95 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 RNU2-31P-201ENST00000516954 155 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 DEFB108E-201ENST00000524692 240 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 AC084364.2-201ENST00000546924 395 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 AC073413.2-201ENST00000604332 360 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.94□□□□□ -2.1
CLDN16Q9Y5I7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 RNU4-13P-201ENST00000364019 141 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 RNU11-5P-201ENST00000391216 129 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 RNU2-61P-201ENST00000411069 191 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 HMGN1P10-201ENST00000474557 553 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 AC024995.1-201ENST00000523014 93 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 AL161670.1-201ENST00000554348 137 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 AL512605.2-201ENST00000592972 256 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.93□□□□□ -2.1
CLDN16Q9Y5I7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.341-201ENST00000365341 102 ntBASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.483-201ENST00000384380 101 ntBASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 MTND4LP30-201ENST00000454092 297 ntBASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-1338P-201ENST00000516328 91 ntBASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
CLDN16Q9Y5I7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 AL391987.6-201ENST00000305671 199 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 MIRLET7G-201ENST00000362280 84 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-326P-201ENST00000365480 107 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.361-201ENST00000365515 120 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.396-201ENST00000383949 103 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.418-201ENST00000384029 102 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 MIR568-201ENST00000385036 95 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 MT-TW-201ENST00000387382 68 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 AC069257.2-201ENST00000441819 155 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 HSPE1P13-201ENST00000451143 297 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 SUB1P4-201ENST00000566062 339 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 MIR4298-201ENST00000584380 73 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.144-201ENST00000363521 113 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.237-201ENST00000364439 102 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.288-201ENST00000364854 92 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.556-201ENST00000384677 113 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 MIR520A-201ENST00000384862 85 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 RNA5SP511-201ENST00000410487 115 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 MTCO1P5-201ENST00000433573 344 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 HSPE1P21-201ENST00000438283 308 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 SNORA44.1-201ENST00000517031 108 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 U4.1-201ENST00000620349 87 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 7SK.10-201ENST00000621414 298 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 U6.108-201ENST00000637764 58 ntBASIC1.9□□□□□ -2.11
CLDN16Q9Y5I7 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
CLDN16Q9Y5I7 Y_RNA.136-201ENST00000363444 102 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms