Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RPL30P4-201ENST00000429309 333 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 CYP2C59P-201ENST00000457790 269 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 RNU6-63P-201ENST00000516690 95 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 RNU6-586P-201ENST00000517265 104 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 MIR3605-201ENST00000583214 100 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 POLR3GP1-201ENST00000594073 261 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.81-201ENST00000362997 102 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 RNU6-1323P-201ENST00000384025 107 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 RNU6-418P-201ENST00000384035 107 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.420-201ENST00000384043 110 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 RN7SKP192-201ENST00000411291 327 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 RNU6-1211P-201ENST00000459179 105 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 CKS1BP2-201ENST00000497342 240 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 RNA5SP20-201ENST00000515976 84 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 AC127455.1-201ENST00000565496 145 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 AC005972.2-201ENST00000604690 348 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 MIR5739-201ENST00000619803 80 ntBASIC3.01□□□□□ -1.93
PDLIM7Q9NR12 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.71-201ENST00000362892 104 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.218-201ENST00000364218 104 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.521-201ENST00000384560 114 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 RNU6-768P-201ENST00000384683 107 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3□□□□□ -1.93
PDLIM7Q9NR12 RNU2-63P-201ENST00000410792 194 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 AL135786.1-201ENST00000415892 214 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3□□□□□ -1.93
PDLIM7Q9NR12 RNU7-197P-201ENST00000458836 62 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 snoU13.23-201ENST00000458863 104 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 RPL23AP54-201ENST00000495129 419 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 RNU6-948P-201ENST00000516374 107 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 RNU6-965P-201ENST00000516721 96 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 DLEU2_6.1-201ENST00000610536 112 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 CTSLP2-204ENST00000629029 392 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 MIR6844-201ENST00000637122 62 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 AL021368.2-201ENST00000606125 5352 ntBASIC3□□□□□ -1.93
PDLIM7Q9NR12 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 RNA5SP205-201ENST00000364653 136 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 MIR592-201ENST00000384959 97 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 AL590004.2-201ENST00000404787 371 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.622-201ENST00000411091 108 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.629-201ENST00000411368 105 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 AC090515.1-201ENST00000465295 476 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 RPL36AP21-201ENST00000490372 323 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 RNU6-1234P-201ENST00000516877 103 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 RNU7-116P-201ENST00000516940 62 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 AC025647.1-201ENST00000517879 253 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 IGKV3-31-201ENST00000523109 329 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 AL031274.2-201ENST00000599419 203 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 AC008264.2-201ENST00000610193 3731 ntBASIC2.99□□□□□ -1.93
PDLIM7Q9NR12 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RNA5SP289-201ENST00000362332 137 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.127-201ENST00000363386 109 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RNU6-438P-201ENST00000365561 103 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 MIR1278-201ENST00000408753 81 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RNA5SP511-201ENST00000410487 115 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RNA5SP492-201ENST00000411330 114 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 Z98742.3-201ENST00000418637 326 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 AC009969.1-201ENST00000438726 172 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RPS27P1-201ENST00000450552 247 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 AC016925.1-201ENST00000458303 298 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RNU6-437P-201ENST00000459408 95 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 AC092991.1-201ENST00000477176 376 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RNU6-1333P-201ENST00000516162 93 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 RPPH1-2P-201ENST00000516688 293 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 AC018630.3-201ENST00000542637 96 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 MIR1248-201ENST00000629190 106 ntBASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM7Q9NR12 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 RNY3P5-201ENST00000384127 102 ntBASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 RNU6-460P-201ENST00000391158 108 ntBASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 RNU6-588P-201ENST00000410281 105 ntBASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 RNU4-43P-201ENST00000410628 137 ntBASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 HMGN2P18-201ENST00000450680 270 ntBASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.97□□□□□ -1.93
PDLIM7Q9NR12 SNORA9.3-201ENST00000516383 129 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms