| MTA3 | Q9BTC8 | FAM214A-201 | ENST00000261844 | 4217 nt | APPRIS P1 TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | KTN1-214 | ENST00000554507 | 2057 nt | TSL 1 (best) BASIC | 3.02 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC009487.2-201 | ENST00000420969 | 6821 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | Y_RNA.172-201 | ENST00000363765 | 102 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-407P-201 | ENST00000365280 | 104 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | Y_RNA.337-201 | ENST00000365312 | 102 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-438P-201 | ENST00000365561 | 103 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-959P-201 | ENST00000384671 | 107 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | SNORA36B-201 | ENST00000410438 | 131 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU2-63P-201 | ENST00000410792 | 194 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AP001043.2-201 | ENST00000434589 | 288 nt | TSL 3 BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC108938.1-201 | ENST00000451204 | 136 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | SNORD65B-201 | ENST00000459126 | 73 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RPS26P55-201 | ENST00000471178 | 356 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | ATP5EP1-201 | ENST00000510257 | 156 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC074131.1-201 | ENST00000514662 | 253 nt | TSL 2 BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | U4atac.1-201 | ENST00000618345 | 95 nt | BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | ARHGAP5-202 | ENST00000345122 | 9604 nt | APPRIS P3 TSL 5 BASIC | 3.01 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU1-72P-201 | ENST00000362976 | 153 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | Y_RNA.229-201 | ENST00000364347 | 113 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-1228P-201 | ENST00000391014 | 107 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | MIR513C-201 | ENST00000401352 | 84 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC008134.1-201 | ENST00000420943 | 193 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC003685.2-201 | ENST00000422795 | 395 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC010154.1-201 | ENST00000425857 | 269 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC016717.1-201 | ENST00000448918 | 286 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AL137159.1-201 | ENST00000452808 | 512 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | LINC02276-201 | ENST00000508388 | 138 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU7-116P-201 | ENST00000516940 | 62 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC007598.1-202 | ENST00000561528 | 435 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | MIR6852-201 | ENST00000621699 | 66 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RBMS2-209 | ENST00000639027 | 192 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | GPR22-201 | ENST00000304402 | 2942 nt | APPRIS P1 TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC009487.4-201 | ENST00000624969 | 3585 nt | BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | SCN1A-219 | ENST00000641575 | 12874 nt | APPRIS ALT1 BASIC | 3 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-199P-201 | ENST00000362954 | 107 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | SNORA5B-201 | ENST00000363786 | 132 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU4-11P-201 | ENST00000365287 | 132 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-1323P-201 | ENST00000384025 | 107 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-22P-201 | ENST00000384355 | 107 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | MIR569-201 | ENST00000385228 | 96 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | TRAV41-201 | ENST00000390468 | 336 nt | APPRIS P1 BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | Y_RNA.586-201 | ENST00000391146 | 98 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AL606845.1-201 | ENST00000404881 | 255 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU2-51P-201 | ENST00000410708 | 197 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC006461.1-201 | ENST00000412637 | 326 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC010409.1-201 | ENST00000487382 | 476 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RPL36AP21-201 | ENST00000490372 | 323 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | CERS3-AS1-201 | ENST00000560643 | 372 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AP003357.1-201 | ENST00000604497 | 148 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AL160287.1-202 | ENST00000638113 | 454 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AP006437.1-201 | ENST00000641440 | 3685 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC016717.2-201 | ENST00000609089 | 5141 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | LCORL-202 | ENST00000382224 | 4984 nt | APPRIS ALT2 TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC130466.1-201 | ENST00000636354 | 4683 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-818P-201 | ENST00000364837 | 108 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNA5SP125-201 | ENST00000364843 | 120 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-728P-201 | ENST00000365375 | 104 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | Y_RNA.510-201 | ENST00000384511 | 114 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | MIR15B-201 | ENST00000385045 | 98 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RPL30P13-201 | ENST00000418873 | 348 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC005703.2-201 | ENST00000453339 | 343 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC016925.1-201 | ENST00000458303 | 298 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC012312.1-201 | ENST00000503710 | 527 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNA5SP20-201 | ENST00000515976 | 84 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-479P-201 | ENST00000516348 | 105 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-826P-201 | ENST00000516827 | 104 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC027419.1-201 | ENST00000522976 | 328 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | POLR3GP1-201 | ENST00000594073 | 261 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC005972.2-201 | ENST00000604690 | 348 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | SNORD14A-201 | ENST00000606526 | 91 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC023490.1-201 | ENST00000614584 | 375 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC011718.1-201 | ENST00000622906 | 375 nt | TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC006435.5-201 | ENST00000624486 | 112 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | CHORDC1-205 | ENST00000529726 | 4805 nt | TSL 2 BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | ATF1-201 | ENST00000262053 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AL356292.1-201 | ENST00000283110 | 373 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | SNORD116-13-201 | ENST00000384408 | 92 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-1235P-201 | ENST00000384559 | 107 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-383P-201 | ENST00000410864 | 94 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RPS12P2-201 | ENST00000439728 | 269 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | LINC02534-201 | ENST00000446525 | 283 nt | TSL 3 BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-498P-201 | ENST00000459468 | 107 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | CKS1BP2-201 | ENST00000497342 | 240 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-313P-201 | ENST00000516317 | 112 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU2-34P-201 | ENST00000516534 | 121 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | RNU6-965P-201 | ENST00000516721 | 96 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC025647.1-201 | ENST00000517879 | 253 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC087362.2-201 | ENST00000529325 | 256 nt | TSL 3 BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC127455.1-201 | ENST00000565496 | 145 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC013412.1-201 | ENST00000610687 | 192 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | MIR5739-201 | ENST00000619803 | 80 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | U4.3-201 | ENST00000621047 | 82 nt | BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AC023490.3-201 | ENST00000621762 | 358 nt | TSL 3 BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | AP000550.4-201 | ENST00000639507 | 358 nt | TSL 3 BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | CHD9-202 | ENST00000398510 | 11337 nt | TSL 1 (best) BASIC | 2.97 | □□□□□ -1.93 | | |
| MTA3 | Q9BTC8 | NEB-203 | ENST00000397345 | 26202 nt | APPRIS ALT2 TSL 5 BASIC | 2.97 | □□□□□ -1.93 | | |