Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PHOX2BQ99453 Z82217.1-201ENST00000625157 8149 ntBASIC3.91□□□□□ -1.78
PHOX2BQ99453 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PHOX2BQ99453 RNU6-268P-201ENST00000364174 107 ntBASIC3.9□□□□□ -1.79
PHOX2BQ99453 RNA5SP97-201ENST00000365006 84 ntBASIC3.9□□□□□ -1.79
PHOX2BQ99453 Y_RNA.547-201ENST00000384654 119 ntBASIC3.9□□□□□ -1.79
PHOX2BQ99453 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PHOX2BQ99453 SNORA26.7-201ENST00000391288 122 ntBASIC3.9□□□□□ -1.79
PHOX2BQ99453 AL627390.1-201ENST00000396055 340 ntBASIC3.9□□□□□ -1.79
PHOX2BQ99453 AL138878.1-201ENST00000405131 347 ntBASIC3.9□□□□□ -1.79
PHOX2BQ99453 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.9□□□□□ -1.79
PHOX2BQ99453 SUMO2P16-201ENST00000519475 264 ntBASIC3.9□□□□□ -1.79
PHOX2BQ99453 AC025627.2-201ENST00000576220 160 ntBASIC3.9□□□□□ -1.79
PHOX2BQ99453 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PHOX2BQ99453 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PHOX2BQ99453 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PHOX2BQ99453 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.9□□□□□ -1.79
PHOX2BQ99453 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.9□□□□□ -1.79
PHOX2BQ99453 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHOX2BQ99453 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHOX2BQ99453 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHOX2BQ99453 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
PHOX2BQ99453 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHOX2BQ99453 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHOX2BQ99453 SNORA60-201ENST00000362396 134 ntBASIC3.89□□□□□ -1.79
PHOX2BQ99453 MIR548D2-201ENST00000384955 97 ntBASIC3.89□□□□□ -1.79
PHOX2BQ99453 MIR592-201ENST00000384959 97 ntBASIC3.89□□□□□ -1.79
PHOX2BQ99453 RPL21P3-201ENST00000395517 478 ntBASIC3.89□□□□□ -1.79
PHOX2BQ99453 AC025554.1-201ENST00000505641 188 ntBASIC3.89□□□□□ -1.79
PHOX2BQ99453 SNORA18.7-201ENST00000516910 131 ntBASIC3.89□□□□□ -1.79
PHOX2BQ99453 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.89□□□□□ -1.79
PHOX2BQ99453 MIR4325-201ENST00000583049 90 ntBASIC3.89□□□□□ -1.79
PHOX2BQ99453 AC006023.1-201ENST00000603944 259 ntBASIC3.89□□□□□ -1.79
PHOX2BQ99453 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PHOX2BQ99453 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
PHOX2BQ99453 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.89□□□□□ -1.79
PHOX2BQ99453 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PHOX2BQ99453 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHOX2BQ99453 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.88□□□□□ -1.79
PHOX2BQ99453 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PHOX2BQ99453 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PHOX2BQ99453 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.88□□□□□ -1.79
PHOX2BQ99453 RNU1-33P-201ENST00000364249 162 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 Y_RNA.351-201ENST00000365436 96 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 Y_RNA.440-201ENST00000384120 114 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 RNU6-49P-201ENST00000384256 107 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 MIR1261-201ENST00000408659 82 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 MIR1912-201ENST00000410389 80 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 AC003685.2-201ENST00000422795 395 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 RPS29P12-201ENST00000460178 152 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 RN7SKP209-201ENST00000516888 304 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 AL033523.1-201ENST00000605153 153 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 MIR7112-201ENST00000616126 65 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PHOX2BQ99453 AC008264.2-201ENST00000610193 3731 ntBASIC3.88□□□□□ -1.79
PHOX2BQ99453 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
PHOX2BQ99453 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHOX2BQ99453 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
PHOX2BQ99453 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHOX2BQ99453 RNA5SP374-201ENST00000362939 125 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 Y_RNA.93-201ENST00000363066 109 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 MIR590-201ENST00000385008 97 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 SNORA48.8-201ENST00000391324 134 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 SNRPGP14-201ENST00000435400 219 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.87□□□□□ -1.79
PHOX2BQ99453 RNU6-830P-201ENST00000516353 107 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 SNORD45.4-201ENST00000516629 73 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 AP003484.1-201ENST00000530974 250 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.87□□□□□ -1.79
PHOX2BQ99453 MIR4305-201ENST00000583252 102 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 AL442128.1-201ENST00000615151 90 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 AL449363.1-201ENST00000617815 186 ntBASIC3.87□□□□□ -1.79
PHOX2BQ99453 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHOX2BQ99453 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PHOX2BQ99453 MIR302B-201ENST00000362188 73 ntBASIC3.86□□□□□ -1.79
PHOX2BQ99453 SNORA80E-201ENST00000384744 137 ntBASIC3.86□□□□□ -1.79
PHOX2BQ99453 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PHOX2BQ99453 MTATP8P2-201ENST00000435212 202 ntBASIC3.86□□□□□ -1.79
PHOX2BQ99453 AL163195.1-201ENST00000496941 348 ntBASIC3.86□□□□□ -1.79
PHOX2BQ99453 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.86□□□□□ -1.79
PHOX2BQ99453 MIR5187-201ENST00000583479 76 ntBASIC3.86□□□□□ -1.79
PHOX2BQ99453 RPL12P50-201ENST00000603116 116 ntBASIC3.86□□□□□ -1.79
PHOX2BQ99453 AL162726.3-218ENST00000636401 95 ntBASIC3.86□□□□□ -1.79
PHOX2BQ99453 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PHOX2BQ99453 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PHOX2BQ99453 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PHOX2BQ99453 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PHOX2BQ99453 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHOX2BQ99453 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHOX2BQ99453 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHOX2BQ99453 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.85□□□□□ -1.79
PHOX2BQ99453 RNA5SP399-201ENST00000364003 117 ntBASIC3.85□□□□□ -1.79
PHOX2BQ99453 RNU4-36P-201ENST00000364294 144 ntBASIC3.85□□□□□ -1.79
PHOX2BQ99453 Y_RNA.265-201ENST00000364677 108 ntBASIC3.85□□□□□ -1.79
PHOX2BQ99453 SNORA25B-201ENST00000365507 128 ntBASIC3.85□□□□□ -1.79
PHOX2BQ99453 ATP5A1P2-201ENST00000412323 255 ntBASIC3.85□□□□□ -1.79
PHOX2BQ99453 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.85□□□□□ -1.79
PHOX2BQ99453 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.85□□□□□ -1.79
PHOX2BQ99453 RN7SL297P-201ENST00000483161 293 ntBASIC3.85□□□□□ -1.79
PHOX2BQ99453 RNU6-904P-201ENST00000516206 101 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms