Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 RNY1P4-201ENST00000384595 115 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 SNORA1.3-201ENST00000384676 136 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 MIR548A2-201ENST00000384956 97 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 SNORA12-201ENST00000391162 147 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 AC009238.1-201ENST00000442165 424 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 AC009237.6-201ENST00000446969 424 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 snoU13.14-201ENST00000459372 104 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 RNU6-693P-201ENST00000516134 107 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 Y_RNA.666-201ENST00000516187 112 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 RNVU1-4-201ENST00000612985 164 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 AC091304.10-201ENST00000641554 121 ntBASIC3.97□□□□□ -1.77
TRIM47Q96LD4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
TRIM47Q96LD4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM47Q96LD4 RNU6-590P-201ENST00000365039 107 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 Y_RNA.360-201ENST00000365512 102 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRIM47Q96LD4 RNU6-750P-201ENST00000390946 107 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 RN7SKP111-201ENST00000410349 271 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 Y_RNA.607-201ENST00000410597 98 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 RPS12P18-201ENST00000442381 270 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 RPS3P1-201ENST00000456781 192 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM47Q96LD4 RNU6-579P-201ENST00000516879 102 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 AC068657.1-201ENST00000520807 306 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 AC011604.1-201ENST00000545978 196 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 MIR3690-201ENST00000580266 75 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 MIR4276-201ENST00000584832 70 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 MIR548BB-201ENST00000626714 66 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 AC010733.2-201ENST00000589496 5702 ntBASIC3.96□□□□□ -1.78
TRIM47Q96LD4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
TRIM47Q96LD4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM47Q96LD4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM47Q96LD4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM47Q96LD4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 AL356274.2-201ENST00000624379 3752 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 Y_RNA.155-201ENST00000363632 101 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 Y_RNA.191-201ENST00000363972 113 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 SNORA18-201ENST00000384416 132 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 MIR493-201ENST00000385254 89 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 Y_RNA.659-201ENST00000515994 113 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 Y_RNA.705-201ENST00000516862 110 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 RNU6-1006P-201ENST00000516998 103 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.95□□□□□ -1.78
TRIM47Q96LD4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM47Q96LD4 PWAR6-201ENST00000552334 4618 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM47Q96LD4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM47Q96LD4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM47Q96LD4 MIR422A-201ENST00000362286 90 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 Z98941.1-201ENST00000407764 100 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 RNU6-887P-201ENST00000410660 100 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 RNU4-47P-201ENST00000410876 114 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 RPL32P35-201ENST00000415214 394 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM47Q96LD4 AC025750.2-201ENST00000442609 450 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 AC107626.1-201ENST00000471084 183 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 AC006445.1-201ENST00000491925 405 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 SNORA70.14-201ENST00000516205 110 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 RN7SKP282-201ENST00000516824 299 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 AC011602.1-201ENST00000546484 331 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 MIR4672-201ENST00000583126 81 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 RPS15AP11-201ENST00000594193 385 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 MIR7106-201ENST00000612419 65 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 AC022149.2-201ENST00000621061 203 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.94□□□□□ -1.78
TRIM47Q96LD4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM47Q96LD4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM47Q96LD4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM47Q96LD4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM47Q96LD4 SNORA5B-201ENST00000363786 132 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 SNORA2.2-201ENST00000365473 135 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 RNU4-69P-201ENST00000410677 143 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 RNU6-733P-201ENST00000410759 104 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 AL161651.1-201ENST00000440882 223 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 RNU6-221P-201ENST00000459541 99 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 AC004486.1-201ENST00000546846 233 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 RPL17P51-201ENST00000605218 238 ntBASIC3.93□□□□□ -1.78
TRIM47Q96LD4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM47Q96LD4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TRIM47Q96LD4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM47Q96LD4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM47Q96LD4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms