Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRCH3Q96II8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.09□□□□□ -1.76
LRCH3Q96II8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRCH3Q96II8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LRCH3Q96II8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LRCH3Q96II8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 RNU6-509P-201ENST00000363519 107 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 SNORD116-10-201ENST00000363791 102 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 RNU6-268P-201ENST00000364174 107 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
LRCH3Q96II8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 RNU6-1201P-201ENST00000384227 107 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 RN7SKP200-201ENST00000410564 320 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 SNRPGP14-201ENST00000435400 219 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 RPS26P15-201ENST00000488067 348 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 RNU1-61P-201ENST00000516107 151 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 RNU2-58P-201ENST00000516403 183 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 RNU6-965P-201ENST00000516721 96 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 RNU6-341P-201ENST00000516973 96 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.08□□□□□ -1.76
LRCH3Q96II8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.08□□□□□ -1.76
LRCH3Q96II8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRCH3Q96II8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LRCH3Q96II8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.08□□□□□ -1.76
LRCH3Q96II8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRCH3Q96II8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LRCH3Q96II8 SNORD9-201ENST00000362566 104 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 SNORD14E-201ENST00000364009 85 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 Y_RNA.565-201ENST00000384719 101 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 RPL32P35-201ENST00000415214 394 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.07□□□□□ -1.76
LRCH3Q96II8 RPL23AP63-201ENST00000498752 471 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 RNU6-237P-201ENST00000515985 71 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 RNU6-856P-201ENST00000516959 98 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 AL358944.1-201ENST00000528537 144 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 AL035425.3-201ENST00000564206 4996 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 PWAR6-201ENST00000552334 4618 ntBASIC4.07□□□□□ -1.76
LRCH3Q96II8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.07□□□□□ -1.76
LRCH3Q96II8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRCH3Q96II8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LRCH3Q96II8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LRCH3Q96II8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LRCH3Q96II8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRCH3Q96II8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRCH3Q96II8 SNX2P2-201ENST00000424553 323 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.06□□□□□ -1.76
LRCH3Q96II8 AC244505.4-201ENST00000434905 287 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 SSXP5-201ENST00000443473 287 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 S100A11P1-201ENST00000477525 312 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 AC093259.1-201ENST00000509755 300 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 RNA5SP341-201ENST00000516261 117 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 RNU6-1006P-201ENST00000516998 103 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.06□□□□□ -1.76
LRCH3Q96II8 MIR4765-201ENST00000585007 77 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 AC002076.2-201ENST00000617362 122 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 MIR7702-201ENST00000621931 59 ntBASIC4.06□□□□□ -1.76
LRCH3Q96II8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.06□□□□□ -1.76
LRCH3Q96II8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.06□□□□□ -1.76
LRCH3Q96II8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRCH3Q96II8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRCH3Q96II8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRCH3Q96II8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRCH3Q96II8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
LRCH3Q96II8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.05□□□□□ -1.76
LRCH3Q96II8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRCH3Q96II8 MIR342-201ENST00000362212 99 ntBASIC4.05□□□□□ -1.76
LRCH3Q96II8 RNU11-5P-201ENST00000391216 129 ntBASIC4.05□□□□□ -1.76
LRCH3Q96II8 AL022718.1-201ENST00000412004 84 ntBASIC4.05□□□□□ -1.76
LRCH3Q96II8 AC060773.1-201ENST00000421698 310 ntBASIC4.05□□□□□ -1.76
LRCH3Q96II8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.05□□□□□ -1.76
LRCH3Q96II8 SNORA4.4-201ENST00000515921 135 ntBASIC4.05□□□□□ -1.76
LRCH3Q96II8 MIR7106-201ENST00000612419 65 ntBASIC4.05□□□□□ -1.76
LRCH3Q96II8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LRCH3Q96II8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
LRCH3Q96II8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
LRCH3Q96II8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRCH3Q96II8 SNORD58A-201ENST00000383875 65 ntBASIC4.04□□□□□ -1.76
LRCH3Q96II8 U8.15-201ENST00000390947 134 ntBASIC4.04□□□□□ -1.76
LRCH3Q96II8 HMGN2P16-201ENST00000456802 261 ntBASIC4.04□□□□□ -1.76
LRCH3Q96II8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.04□□□□□ -1.76
LRCH3Q96II8 RNU6-586P-201ENST00000517265 104 ntBASIC4.04□□□□□ -1.76
LRCH3Q96II8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.04□□□□□ -1.76
LRCH3Q96II8 ELOCP29-201ENST00000588193 334 ntBASIC4.04□□□□□ -1.76
LRCH3Q96II8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LRCH3Q96II8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.04□□□□□ -1.76
LRCH3Q96II8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRCH3Q96II8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRCH3Q96II8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.04□□□□□ -1.76
LRCH3Q96II8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRCH3Q96II8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRCH3Q96II8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
LRCH3Q96II8 SNORA1B-201ENST00000362535 133 ntBASIC4.03□□□□□ -1.76
LRCH3Q96II8 RPL23AP48-201ENST00000406913 488 ntBASIC4.03□□□□□ -1.76
LRCH3Q96II8 RNU4-69P-201ENST00000410677 143 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms