Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-674P-201ENST00000363831 107 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 SNORA25.7-201ENST00000364375 127 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 RNU6-1082P-201ENST00000364574 107 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 SNORD116-13-201ENST00000384408 92 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 RNU6-429P-201ENST00000384582 108 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 Y_RNA.587-201ENST00000391210 103 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 MIR1278-201ENST00000408753 81 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 RNU2-55P-201ENST00000411146 174 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
SHISA4Q96DD7 RNU7-14P-201ENST00000459331 62 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 RN7SL297P-201ENST00000483161 293 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 CYCTP-201ENST00000504253 315 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.1□□□□□ -1.91
SHISA4Q96DD7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.1□□□□□ -1.91
SHISA4Q96DD7 SNORA31.1-201ENST00000515993 133 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 SNORA31.5-201ENST00000516190 133 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 MIR3605-201ENST00000583214 100 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 AC120024.3-201ENST00000603167 156 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 snoZ196.1-201ENST00000625269 89 ntBASIC3.1□□□□□ -1.91
SHISA4Q96DD7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.1□□□□□ -1.91
SHISA4Q96DD7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SHISA4Q96DD7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHISA4Q96DD7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.09□□□□□ -1.91
SHISA4Q96DD7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA4Q96DD7 RNU4-41P-201ENST00000364426 143 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 MIR1294-201ENST00000408503 142 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 RN7SKP101-201ENST00000411376 320 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 AL135786.1-201ENST00000415892 214 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.09□□□□□ -1.91
SHISA4Q96DD7 EIF4EP4-201ENST00000424916 578 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 AC092185.1-201ENST00000491371 97 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 Y_RNA.692-201ENST00000516627 105 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 RNU6-197P-201ENST00000516680 100 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.09□□□□□ -1.91
SHISA4Q96DD7 MIR4648-201ENST00000580107 72 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 AC023043.3-201ENST00000593113 385 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 RPL30P11-203ENST00000598995 310 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 MIR6129-201ENST00000616087 109 ntBASIC3.09□□□□□ -1.91
SHISA4Q96DD7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA4Q96DD7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA4Q96DD7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
SHISA4Q96DD7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA4Q96DD7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SHISA4Q96DD7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SHISA4Q96DD7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHISA4Q96DD7 RNY1P11-201ENST00000363759 113 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 RN7SKP223-201ENST00000410582 62 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
SHISA4Q96DD7 Z98742.2-201ENST00000431564 187 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 SNORD65B-201ENST00000459126 73 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 Y_RNA.709-201ENST00000516952 92 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 AC090517.3-201ENST00000625170 141 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 CTSLP2-204ENST00000629029 392 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 MIR6733-201ENST00000635723 61 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 U6.95-201ENST00000636931 70 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.08□□□□□ -1.92
SHISA4Q96DD7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
SHISA4Q96DD7 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
SHISA4Q96DD7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHISA4Q96DD7 AL356292.1-201ENST00000283110 373 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 RNU6-235P-201ENST00000362644 107 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 Y_RNA.432-201ENST00000384087 111 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 Y_RNA.525-201ENST00000384570 113 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.07□□□□□ -1.92
SHISA4Q96DD7 RNU6-221P-201ENST00000459541 99 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 RNA5SP20-201ENST00000515976 84 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 AL160236.1-201ENST00000556317 195 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 MTND5P34-201ENST00000568888 325 ntBASIC3.07□□□□□ -1.92
SHISA4Q96DD7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
SHISA4Q96DD7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHISA4Q96DD7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHISA4Q96DD7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.06□□□□□ -1.92
SHISA4Q96DD7 Y_RNA.43-201ENST00000362670 111 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 RNU1-105P-201ENST00000363470 161 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 RNU4-13P-201ENST00000364019 141 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 RNU6-975P-201ENST00000384296 105 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 SNORD14D-201ENST00000384390 87 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 RNA5SP252-201ENST00000391131 119 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 RNU4-53P-201ENST00000410828 140 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 AL158823.1-201ENST00000418441 478 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 CYCSP49-201ENST00000420810 319 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 HMGN2P3-201ENST00000433603 273 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 HMGN2P5-201ENST00000436882 273 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 AC096725.1-201ENST00000514266 313 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 RNU5E-3P-201ENST00000515913 68 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 RNU6-1299P-201ENST00000516316 100 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 SNORA9.3-201ENST00000516383 129 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 MIR3121-201ENST00000579680 77 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 AC103810.1-201ENST00000579873 453 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 MIR4765-201ENST00000585007 77 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 MIR3914-2-201ENST00000637339 95 ntBASIC3.06□□□□□ -1.92
SHISA4Q96DD7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHISA4Q96DD7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHISA4Q96DD7 AC009487.4-201ENST00000624969 3585 ntBASIC3.05□□□□□ -1.92
SHISA4Q96DD7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA4Q96DD7 Y_RNA.120-201ENST00000363304 110 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 506.9 ms