Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SNORA3.2-201ENST00000408221 125 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM41Q8WV44 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM41Q8WV44 RNU6-948P-201ENST00000516374 107 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 AC109329.2-201ENST00000519658 482 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 AC011604.1-201ENST00000545978 196 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 AC009831.4-201ENST00000620744 325 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM41Q8WV44 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM41Q8WV44 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM41Q8WV44 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM41Q8WV44 AC010680.1-201ENST00000590024 3590 ntBASIC5.36□□□□□ -1.55
TRIM41Q8WV44 MIR184-201ENST00000384962 84 ntBASIC5.36□□□□□ -1.55
TRIM41Q8WV44 RNY4P29-201ENST00000410801 97 ntBASIC5.36□□□□□ -1.55
TRIM41Q8WV44 Y_RNA.621-201ENST00000411065 96 ntBASIC5.36□□□□□ -1.55
TRIM41Q8WV44 AC008134.1-201ENST00000420943 193 ntBASIC5.36□□□□□ -1.55
TRIM41Q8WV44 AL513328.1-201ENST00000446460 224 ntBASIC5.36□□□□□ -1.55
TRIM41Q8WV44 AC245102.2-201ENST00000448956 180 ntBASIC5.36□□□□□ -1.55
TRIM41Q8WV44 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM41Q8WV44 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM41Q8WV44 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM41Q8WV44 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM41Q8WV44 Y_RNA.85-201ENST00000363014 111 ntBASIC5.35□□□□□ -1.55
TRIM41Q8WV44 AC063976.3-201ENST00000426849 329 ntBASIC5.35□□□□□ -1.55
TRIM41Q8WV44 TRBV25OR9-2-201ENST00000438417 374 ntBASIC5.35□□□□□ -1.55
TRIM41Q8WV44 RNU6-126P-201ENST00000516685 103 ntBASIC5.35□□□□□ -1.55
TRIM41Q8WV44 AL365205.2-201ENST00000594586 68 ntBASIC5.35□□□□□ -1.55
TRIM41Q8WV44 AC110741.2-201ENST00000605278 268 ntBASIC5.35□□□□□ -1.55
TRIM41Q8WV44 AC006435.5-201ENST00000624486 112 ntBASIC5.35□□□□□ -1.55
TRIM41Q8WV44 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM41Q8WV44 AP006437.1-201ENST00000641440 3685 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
TRIM41Q8WV44 RNU6-1240P-201ENST00000365155 104 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 Y_RNA.328-201ENST00000365208 113 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 RNU6-438P-201ENST00000365561 103 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 SNORA51.10-201ENST00000384418 136 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 Y_RNA.549-201ENST00000384657 102 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 AC007064.1-201ENST00000412238 351 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 RPL30P4-201ENST00000429309 333 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 CALM2P4-201ENST00000430810 426 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 AC010401.1-201ENST00000463867 348 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 AP001318.4-201ENST00000616637 121 ntBASIC5.34□□□□□ -1.55
TRIM41Q8WV44 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM41Q8WV44 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM41Q8WV44 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM41Q8WV44 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TRIM41Q8WV44 ZNF658B-202ENST00000615961 3375 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 Y_RNA.388-201ENST00000383919 113 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 MIR196B-201ENST00000384852 84 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 MIR562-201ENST00000384894 95 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 MIR570-201ENST00000384917 97 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 RNA5SP38-201ENST00000410750 119 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 RNU6ATAC13P-201ENST00000516152 131 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 RNU7-172P-201ENST00000517125 64 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 SCARNA20.6-201ENST00000517251 106 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 MIR4765-201ENST00000585007 77 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 MIR4438-201ENST00000585271 93 ntBASIC5.33□□□□□ -1.56
TRIM41Q8WV44 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM41Q8WV44 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM41Q8WV44 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM41Q8WV44 RNU6-944P-201ENST00000364023 107 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 SNORD31B-201ENST00000364977 69 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 RNU6-1138P-201ENST00000365359 106 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 SNORA1-201ENST00000384107 130 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 MIR3074-201ENST00000384885 81 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 SNORA12.1-201ENST00000390873 148 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 RNA5SP252-201ENST00000391131 119 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 RNU6-504P-201ENST00000516568 104 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 RNU6-762P-201ENST00000517107 102 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 IGKV3-31-201ENST00000523109 329 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 MIR5047-201ENST00000579212 100 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 AC103810.1-201ENST00000579873 453 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM41Q8WV44 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.32□□□□□ -1.56
TRIM41Q8WV44 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM41Q8WV44 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM41Q8WV44 Y_RNA.66-201ENST00000362862 102 ntBASIC5.31□□□□□ -1.56
TRIM41Q8WV44 RNU1-22P-201ENST00000363334 158 ntBASIC5.31□□□□□ -1.56
TRIM41Q8WV44 SNORA63.5-201ENST00000363548 123 ntBASIC5.31□□□□□ -1.56
TRIM41Q8WV44 Y_RNA.558-201ENST00000384685 113 ntBASIC5.31□□□□□ -1.56
TRIM41Q8WV44 EDDM3CP-201ENST00000415977 425 ntBASIC5.31□□□□□ -1.56
TRIM41Q8WV44 MRPS36P2-201ENST00000512569 299 ntBASIC5.31□□□□□ -1.56
TRIM41Q8WV44 IGHVIII-67-2-201ENST00000519849 88 ntBASIC5.31□□□□□ -1.56
TRIM41Q8WV44 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM41Q8WV44 RNU6-49P-201ENST00000384256 107 ntBASIC5.3□□□□□ -1.56
TRIM41Q8WV44 RNU6-1274P-201ENST00000384557 107 ntBASIC5.3□□□□□ -1.56
TRIM41Q8WV44 MIR767-201ENST00000390228 109 ntBASIC5.3□□□□□ -1.56
TRIM41Q8WV44 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM41Q8WV44 AC016909.1-201ENST00000415916 166 ntBASIC5.3□□□□□ -1.56
TRIM41Q8WV44 RNU6-1270P-201ENST00000517128 108 ntBASIC5.3□□□□□ -1.56
TRIM41Q8WV44 U6.73-201ENST00000619194 103 ntBASIC5.3□□□□□ -1.56
TRIM41Q8WV44 AL355596.1-201ENST00000565399 3996 ntBASIC5.3□□□□□ -1.56
TRIM41Q8WV44 RNU6-1235P-201ENST00000384559 107 ntBASIC5.29□□□□□ -1.56
TRIM41Q8WV44 RNA5SP239-201ENST00000410218 129 ntBASIC5.29□□□□□ -1.56
TRIM41Q8WV44 RNA5SP136-201ENST00000410906 107 ntBASIC5.29□□□□□ -1.56
TRIM41Q8WV44 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM41Q8WV44 RNU6-498P-201ENST00000459468 107 ntBASIC5.29□□□□□ -1.56
TRIM41Q8WV44 RPL39P34-201ENST00000477141 156 ntBASIC5.29□□□□□ -1.56
TRIM41Q8WV44 AC097462.1-201ENST00000514125 324 ntBASIC5.29□□□□□ -1.56
TRIM41Q8WV44 RNU6-1053P-201ENST00000515930 101 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms