Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR126-201ENST00000362291 85 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 SNORD74.4-201ENST00000364129 80 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 SNORD24-201ENST00000383884 75 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 RNU6-1014P-201ENST00000383940 103 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 RNU6-440P-201ENST00000390882 105 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 RNU2-63P-201ENST00000410792 194 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 RNU7-170P-201ENST00000459303 61 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 AC023141.11-201ENST00000508864 202 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 RN7SKP43-201ENST00000516173 320 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 RNU6-113P-201ENST00000516653 101 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 GTF3AP2-201ENST00000557014 266 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 MIR6079-201ENST00000635807 62 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 AP000553.6-201ENST00000641242 118 ntBASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
PRPF38BQ5VTL8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PRPF38BQ5VTL8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 Y_RNA.466-201ENST00000384294 113 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 RNA5SP467-201ENST00000391274 118 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 SNRPGP13-201ENST00000442212 177 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 snoU13.23-201ENST00000458863 104 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 RPL39P34-201ENST00000477141 156 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 RNU6-1041P-201ENST00000516254 102 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 AL355297.2-201ENST00000604792 129 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 AL137067.1-201ENST00000615933 120 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 AL035470.1-201ENST00000622571 220 ntBASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF38BQ5VTL8 AC245060.5-201ENST00000610778 3293 ntBASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 RNU6-573P-201ENST00000383938 106 ntBASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 AL357552.1-201ENST00000445254 415 ntBASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 RN7SL585P-201ENST00000470538 280 ntBASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 RNA5SP281-201ENST00000516504 135 ntBASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 RNU1-142P-201ENST00000516682 145 ntBASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 SNORA48.11-201ENST00000517015 89 ntBASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 AC068657.1-201ENST00000520807 306 ntBASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PRPF38BQ5VTL8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 MIR95-201ENST00000385072 81 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 RNA5SP323-201ENST00000391094 133 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 AL590004.2-201ENST00000404787 371 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 SCGB1D5P-201ENST00000515134 247 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 RNU6-970P-201ENST00000516312 107 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 RN7SKP282-201ENST00000516824 299 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 RNU6-341P-201ENST00000516973 96 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 RNU6-94P-201ENST00000607728 107 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 AL442128.1-201ENST00000615151 90 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 ZNF271P-202ENST00000465539 1970 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 AP006437.1-201ENST00000641440 3685 ntBASIC3.88□□□□□ -1.79
PRPF38BQ5VTL8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 MIR340-201ENST00000362125 95 ntBASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 Y_RNA.323-201ENST00000365157 109 ntBASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 Y_RNA.366-201ENST00000365540 102 ntBASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 RNY1P7-201ENST00000384743 110 ntBASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 SNORD77.3-201ENST00000391113 65 ntBASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 AL356280.1-201ENST00000603614 379 ntBASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF38BQ5VTL8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 Y_RNA.544-201ENST00000384650 113 ntBASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 RNU6-482P-201ENST00000391068 107 ntBASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 RNU6-592P-201ENST00000411333 103 ntBASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 COX6CP6-201ENST00000490840 228 ntBASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 AC091826.1-201ENST00000514065 313 ntBASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 IGKV2-26-201ENST00000518305 343 ntBASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 AC087685.1-201ENST00000587507 141 ntBASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF38BQ5VTL8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF38BQ5VTL8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF38BQ5VTL8 SNORA63.5-201ENST00000363548 123 ntBASIC3.85□□□□□ -1.79
PRPF38BQ5VTL8 RNU6-1113P-201ENST00000384348 107 ntBASIC3.85□□□□□ -1.79
PRPF38BQ5VTL8 MIR561-201ENST00000385216 97 ntBASIC3.85□□□□□ -1.79
PRPF38BQ5VTL8 ARF4P2-201ENST00000430209 526 ntBASIC3.85□□□□□ -1.79
PRPF38BQ5VTL8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF38BQ5VTL8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF38BQ5VTL8 AC021205.2-201ENST00000480069 347 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms