Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPL36AP48-201ENST00000485521 314 ntBASIC4.04□□□□□ -1.76
RC3H1Q5TC82 RNA5SP356-201ENST00000515972 94 ntBASIC4.04□□□□□ -1.76
RC3H1Q5TC82 MIR4474-201ENST00000579189 78 ntBASIC4.04□□□□□ -1.76
RC3H1Q5TC82 AC008739.2-201ENST00000597006 317 ntBASIC4.04□□□□□ -1.76
RC3H1Q5TC82 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RC3H1Q5TC82 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
RC3H1Q5TC82 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RC3H1Q5TC82 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RC3H1Q5TC82 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RC3H1Q5TC82 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.03□□□□□ -1.76
RC3H1Q5TC82 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RC3H1Q5TC82 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RC3H1Q5TC82 MIR449A-201ENST00000362113 91 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 RNU6-1240P-201ENST00000365155 104 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 RNU6-750P-201ENST00000390946 107 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 ARF4P2-201ENST00000430209 526 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 AL139132.1-201ENST00000431587 344 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.03□□□□□ -1.76
RC3H1Q5TC82 AC022137.1-201ENST00000483735 151 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 AC097462.1-201ENST00000514125 324 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 FAM71BP1-201ENST00000604431 523 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RC3H1Q5TC82 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.03□□□□□ -1.76
RC3H1Q5TC82 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.03□□□□□ -1.76
RC3H1Q5TC82 AL365361.1-201ENST00000566942 3481 ntBASIC4.03□□□□□ -1.76
RC3H1Q5TC82 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RC3H1Q5TC82 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
RC3H1Q5TC82 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 RNU6-486P-201ENST00000363116 107 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 Y_RNA.244-201ENST00000364484 109 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 AC016909.1-201ENST00000415916 166 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 RPL39P39-201ENST00000455840 151 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 RNU6-693P-201ENST00000516134 107 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 RNU6-521P-201ENST00000516663 105 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 RNU7-172P-201ENST00000517125 64 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 NDUFB9P3-201ENST00000521269 501 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 uc_338.25-201ENST00000613756 156 ntBASIC4.02□□□□□ -1.77
RC3H1Q5TC82 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.02□□□□□ -1.77
RC3H1Q5TC82 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RC3H1Q5TC82 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RC3H1Q5TC82 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RC3H1Q5TC82 SNORD15B-201ENST00000384714 146 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 MIR548D2-201ENST00000384955 97 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 MIR1294-201ENST00000408503 142 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 AL513477.1-202ENST00000417061 214 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 SCARNA23-201ENST00000516060 130 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 Y_RNA.666-201ENST00000516187 112 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 AC109329.2-201ENST00000519658 482 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 DEFB131E-201ENST00000532329 154 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 MIR4438-201ENST00000585271 93 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 ELOCP29-201ENST00000588193 334 ntBASIC4.01□□□□□ -1.77
RC3H1Q5TC82 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.01□□□□□ -1.77
RC3H1Q5TC82 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RC3H1Q5TC82 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4□□□□□ -1.77
RC3H1Q5TC82 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
RC3H1Q5TC82 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4□□□□□ -1.77
RC3H1Q5TC82 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4□□□□□ -1.77
RC3H1Q5TC82 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4□□□□□ -1.77
RC3H1Q5TC82 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4□□□□□ -1.77
RC3H1Q5TC82 RNY1P1-201ENST00000364372 112 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 SNORD31B-201ENST00000364977 69 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 RNU6-690P-201ENST00000365242 106 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 RNU6-1235P-201ENST00000384559 107 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 MIR548A2-201ENST00000384956 97 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 EEF1A1P41-201ENST00000414667 207 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 RNU6-498P-201ENST00000459468 107 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 RPS29P21-201ENST00000496272 170 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 GTF3AP2-201ENST00000557014 266 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4□□□□□ -1.77
RC3H1Q5TC82 MIR5197-201ENST00000583721 112 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 IGLL4P-201ENST00000614590 133 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 AL162726.3-218ENST00000636401 95 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 MIR376A2-201ENST00000636782 80 ntBASIC4□□□□□ -1.77
RC3H1Q5TC82 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RC3H1Q5TC82 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4□□□□□ -1.77
RC3H1Q5TC82 RNU4-36P-201ENST00000364294 144 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 RNU6-234P-201ENST00000365229 104 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 RNU6-418P-201ENST00000384035 107 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.99□□□□□ -1.77
RC3H1Q5TC82 RNU7-23P-201ENST00000459465 62 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 AC091826.1-201ENST00000514065 313 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 RNA5SP367-201ENST00000516557 118 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 RN7SKP282-201ENST00000516824 299 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.99□□□□□ -1.77
RC3H1Q5TC82 MIR4738-201ENST00000579134 87 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 MIR3945-201ENST00000581853 98 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.99□□□□□ -1.77
RC3H1Q5TC82 AC013412.1-201ENST00000610687 192 ntBASIC3.99□□□□□ -1.77
RC3H1Q5TC82 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.99□□□□□ -1.77
RC3H1Q5TC82 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RC3H1Q5TC82 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RC3H1Q5TC82 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms