Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCBP3Q53F19 Y_RNA.448-201ENST00000384185 108 ntBASIC5.81□□□□□ -1.48
NCBP3Q53F19 RNU6-342P-201ENST00000384521 104 ntBASIC5.81□□□□□ -1.48
NCBP3Q53F19 RNU6-1072P-201ENST00000384703 107 ntBASIC5.81□□□□□ -1.48
NCBP3Q53F19 RNU6-443P-201ENST00000384780 107 ntBASIC5.81□□□□□ -1.48
NCBP3Q53F19 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC5.81□□□□□ -1.48
NCBP3Q53F19 AL020996.3-201ENST00000606617 222 ntBASIC5.81□□□□□ -1.48
NCBP3Q53F19 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NCBP3Q53F19 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC5.81□□□□□ -1.48
NCBP3Q53F19 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCBP3Q53F19 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCBP3Q53F19 AC010300.1-201ENST00000600671 5134 ntBASIC5.81□□□□□ -1.48
NCBP3Q53F19 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NCBP3Q53F19 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NCBP3Q53F19 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NCBP3Q53F19 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NCBP3Q53F19 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NCBP3Q53F19 AL450471.1-201ENST00000447509 127 ntBASIC5.8□□□□□ -1.48
NCBP3Q53F19 RNU6-539P-201ENST00000516665 103 ntBASIC5.8□□□□□ -1.48
NCBP3Q53F19 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC5.8□□□□□ -1.48
NCBP3Q53F19 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC5.8□□□□□ -1.48
NCBP3Q53F19 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NCBP3Q53F19 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NCBP3Q53F19 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.8□□□□□ -1.48
NCBP3Q53F19 GABRG2-229ENST00000641017 3628 ntBASIC5.79□□□□□ -1.48
NCBP3Q53F19 MIR516B2-201ENST00000385190 85 ntBASIC5.79□□□□□ -1.48
NCBP3Q53F19 RNU6-913P-201ENST00000390913 95 ntBASIC5.79□□□□□ -1.48
NCBP3Q53F19 RNA5SP332-201ENST00000391063 115 ntBASIC5.79□□□□□ -1.48
NCBP3Q53F19 RNU6-519P-201ENST00000410590 108 ntBASIC5.79□□□□□ -1.48
NCBP3Q53F19 HMSD-204ENST00000526932 162 ntTSL 3 BASIC5.79□□□□□ -1.48
NCBP3Q53F19 AC100770.1-201ENST00000532310 322 ntBASIC5.79□□□□□ -1.48
NCBP3Q53F19 MIR4715-201ENST00000584117 79 ntBASIC5.79□□□□□ -1.48
NCBP3Q53F19 AL442644.1-201ENST00000454390 3105 ntBASIC5.79□□□□□ -1.48
NCBP3Q53F19 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NCBP3Q53F19 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NCBP3Q53F19 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NCBP3Q53F19 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCBP3Q53F19 MAPK10-362ENST00000641864 4484 ntBASIC5.78□□□□□ -1.48
NCBP3Q53F19 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCBP3Q53F19 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCBP3Q53F19 AC091390.1-201ENST00000433904 331 ntBASIC5.78□□□□□ -1.48
NCBP3Q53F19 AC018868.1-201ENST00000491307 315 ntBASIC5.78□□□□□ -1.48
NCBP3Q53F19 MIR5047-201ENST00000579212 100 ntBASIC5.78□□□□□ -1.48
NCBP3Q53F19 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.78□□□□□ -1.48
NCBP3Q53F19 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.78□□□□□ -1.48
NCBP3Q53F19 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCBP3Q53F19 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.48
NCBP3Q53F19 Y_RNA.168-201ENST00000363740 102 ntBASIC5.77□□□□□ -1.49
NCBP3Q53F19 RNA5SP138-201ENST00000365098 114 ntBASIC5.77□□□□□ -1.49
NCBP3Q53F19 AC245047.7-201ENST00000440265 293 ntBASIC5.77□□□□□ -1.49
NCBP3Q53F19 ABCF2P2-201ENST00000450549 296 ntBASIC5.77□□□□□ -1.49
NCBP3Q53F19 RN7SL810P-201ENST00000493031 276 ntBASIC5.77□□□□□ -1.49
NCBP3Q53F19 SEM1P1-201ENST00000506694 209 ntBASIC5.77□□□□□ -1.49
NCBP3Q53F19 AC023141.11-201ENST00000508864 202 ntBASIC5.77□□□□□ -1.49
NCBP3Q53F19 AC012676.2-201ENST00000619258 186 ntBASIC5.77□□□□□ -1.49
NCBP3Q53F19 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCBP3Q53F19 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCBP3Q53F19 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCBP3Q53F19 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCBP3Q53F19 Y_RNA.340-201ENST00000365330 92 ntBASIC5.76□□□□□ -1.49
NCBP3Q53F19 MIR1236-201ENST00000408340 102 ntBASIC5.76□□□□□ -1.49
NCBP3Q53F19 RN7SL98P-201ENST00000462271 300 ntBASIC5.76□□□□□ -1.49
NCBP3Q53F19 RN7SL385P-201ENST00000468873 276 ntBASIC5.76□□□□□ -1.49
NCBP3Q53F19 MIR7154-201ENST00000620673 73 ntBASIC5.76□□□□□ -1.49
NCBP3Q53F19 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NCBP3Q53F19 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
NCBP3Q53F19 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.75□□□□□ -1.49
NCBP3Q53F19 AC006483.1-201ENST00000487308 313 ntBASIC5.75□□□□□ -1.49
NCBP3Q53F19 MTND5P40-201ENST00000559945 246 ntBASIC5.75□□□□□ -1.49
NCBP3Q53F19 AC113403.1-201ENST00000604910 193 ntBASIC5.75□□□□□ -1.49
NCBP3Q53F19 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NCBP3Q53F19 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
NCBP3Q53F19 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.75□□□□□ -1.49
NCBP3Q53F19 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.74□□□□□ -1.49
NCBP3Q53F19 Y_RNA.173-201ENST00000363776 113 ntBASIC5.74□□□□□ -1.49
NCBP3Q53F19 RNU6-480P-201ENST00000384332 107 ntBASIC5.74□□□□□ -1.49
NCBP3Q53F19 RPS12P10-201ENST00000427031 377 ntBASIC5.74□□□□□ -1.49
NCBP3Q53F19 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.74□□□□□ -1.49
NCBP3Q53F19 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.74□□□□□ -1.49
NCBP3Q53F19 SNORD67.1-201ENST00000516618 108 ntBASIC5.74□□□□□ -1.49
NCBP3Q53F19 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCBP3Q53F19 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NCBP3Q53F19 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC5.74□□□□□ -1.49
NCBP3Q53F19 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCBP3Q53F19 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCBP3Q53F19 AC007336.1-201ENST00000576365 3828 ntBASIC5.74□□□□□ -1.49
NCBP3Q53F19 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NCBP3Q53F19 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.73□□□□□ -1.49
NCBP3Q53F19 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.73□□□□□ -1.49
NCBP3Q53F19 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCBP3Q53F19 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NCBP3Q53F19 RNU6-833P-201ENST00000363486 107 ntBASIC5.73□□□□□ -1.49
NCBP3Q53F19 SNORA62-201ENST00000365493 153 ntBASIC5.73□□□□□ -1.49
NCBP3Q53F19 U8.16-201ENST00000391279 133 ntBASIC5.73□□□□□ -1.49
NCBP3Q53F19 RNU7-73P-201ENST00000458743 63 ntBASIC5.73□□□□□ -1.49
NCBP3Q53F19 RN7SL691P-201ENST00000494487 301 ntBASIC5.73□□□□□ -1.49
NCBP3Q53F19 AC234781.5-201ENST00000508429 271 ntBASIC5.73□□□□□ -1.49
NCBP3Q53F19 RNU7-35P-201ENST00000517174 62 ntBASIC5.73□□□□□ -1.49
NCBP3Q53F19 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC5.73□□□□□ -1.49
NCBP3Q53F19 AC243994.1-201ENST00000618627 109 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms