Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 U6.73-201ENST00000619194 103 ntBASIC2.82□□□□□ -1.96
LTBRP36941 AC132825.6-201ENST00000638861 357 ntBASIC2.82□□□□□ -1.96
LTBRP36941 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
LTBRP36941 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.81□□□□□ -1.96
LTBRP36941 SNORA72-201ENST00000384339 132 ntBASIC2.81□□□□□ -1.96
LTBRP36941 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LTBRP36941 RNU6-1228P-201ENST00000391014 107 ntBASIC2.81□□□□□ -1.96
LTBRP36941 RNU4-53P-201ENST00000410828 140 ntBASIC2.81□□□□□ -1.96
LTBRP36941 AC107027.2-201ENST00000512197 115 ntBASIC2.81□□□□□ -1.96
LTBRP36941 Y_RNA.676-201ENST00000516393 96 ntBASIC2.81□□□□□ -1.96
LTBRP36941 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.81□□□□□ -1.96
LTBRP36941 MIR4648-201ENST00000580107 72 ntBASIC2.81□□□□□ -1.96
LTBRP36941 AL449363.1-201ENST00000617815 186 ntBASIC2.81□□□□□ -1.96
LTBRP36941 U4atac.1-201ENST00000618345 95 ntBASIC2.81□□□□□ -1.96
LTBRP36941 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LTBRP36941 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LTBRP36941 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.8□□□□□ -1.96
LTBRP36941 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LTBRP36941 RNU6-674P-201ENST00000363831 107 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RNU6-151P-201ENST00000364158 107 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RNU6-704P-201ENST00000364162 103 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RNU4-41P-201ENST00000364426 143 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RNU6-1180P-201ENST00000364935 107 ntBASIC2.8□□□□□ -1.96
LTBRP36941 Y_RNA.400-201ENST00000383963 111 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RNU6-417P-201ENST00000384712 107 ntBASIC2.8□□□□□ -1.96
LTBRP36941 MIR15B-201ENST00000385045 98 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.8□□□□□ -1.96
LTBRP36941 AL591806.2-201ENST00000433122 173 ntBASIC2.8□□□□□ -1.96
LTBRP36941 AC104389.3-201ENST00000445629 235 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RPS4XP11-201ENST00000446897 772 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RNU6-1041P-201ENST00000516254 102 ntBASIC2.8□□□□□ -1.96
LTBRP36941 RNA5SP282-201ENST00000516355 108 ntBASIC2.8□□□□□ -1.96
LTBRP36941 NDUFA5P6-201ENST00000542110 379 ntBASIC2.8□□□□□ -1.96
LTBRP36941 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.8□□□□□ -1.96
LTBRP36941 Y_RNA.778-201ENST00000620203 90 ntBASIC2.8□□□□□ -1.96
LTBRP36941 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.8□□□□□ -1.96
LTBRP36941 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.8□□□□□ -1.96
LTBRP36941 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LTBRP36941 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.8□□□□□ -1.96
LTBRP36941 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LTBRP36941 snoU2-30.2-201ENST00000362805 70 ntBASIC2.79□□□□□ -1.96
LTBRP36941 Y_RNA.99-201ENST00000363138 105 ntBASIC2.79□□□□□ -1.96
LTBRP36941 SNORD50.2-201ENST00000365465 70 ntBASIC2.79□□□□□ -1.96
LTBRP36941 MIR512-1-201ENST00000384913 84 ntBASIC2.79□□□□□ -1.96
LTBRP36941 RNU6-1186P-201ENST00000410429 97 ntBASIC2.79□□□□□ -1.96
LTBRP36941 RN7SKP223-201ENST00000410582 62 ntBASIC2.79□□□□□ -1.96
LTBRP36941 AC006461.1-201ENST00000412637 326 ntBASIC2.79□□□□□ -1.96
LTBRP36941 RNU6-561P-201ENST00000516222 102 ntBASIC2.79□□□□□ -1.96
LTBRP36941 SNORD116-25-201ENST00000516517 92 ntBASIC2.79□□□□□ -1.96
LTBRP36941 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.79□□□□□ -1.96
LTBRP36941 DEFB122-202ENST00000569013 197 ntBASIC2.79□□□□□ -1.96
LTBRP36941 ZNF861P-201ENST00000588126 639 ntBASIC2.79□□□□□ -1.96
LTBRP36941 AL929325.1-201ENST00000603096 117 ntBASIC2.79□□□□□ -1.96
LTBRP36941 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LTBRP36941 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.78□□□□□ -1.96
LTBRP36941 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
LTBRP36941 SNORD114-6-201ENST00000364393 72 ntBASIC2.78□□□□□ -1.96
LTBRP36941 RNU6-728P-201ENST00000365375 104 ntBASIC2.78□□□□□ -1.96
LTBRP36941 RNA5SP496-201ENST00000391240 109 ntBASIC2.78□□□□□ -1.96
LTBRP36941 AL512604.1-201ENST00000404812 257 ntBASIC2.78□□□□□ -1.96
LTBRP36941 MIR1262-201ENST00000408276 93 ntBASIC2.78□□□□□ -1.96
LTBRP36941 RNA5SP425-201ENST00000410336 112 ntBASIC2.78□□□□□ -1.96
LTBRP36941 RPS27P29-201ENST00000463110 252 ntBASIC2.78□□□□□ -1.96
LTBRP36941 AC092185.1-201ENST00000491371 97 ntBASIC2.78□□□□□ -1.96
LTBRP36941 RNU7-121P-201ENST00000516604 62 ntBASIC2.78□□□□□ -1.96
LTBRP36941 AP001485.1-201ENST00000604799 199 ntBASIC2.78□□□□□ -1.96
LTBRP36941 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.78□□□□□ -1.96
LTBRP36941 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.78□□□□□ -1.96
LTBRP36941 SNORD114-30-201ENST00000364448 72 ntBASIC2.77□□□□□ -1.97
LTBRP36941 Y_RNA.343-201ENST00000365354 112 ntBASIC2.77□□□□□ -1.97
LTBRP36941 RNY3P5-201ENST00000384127 102 ntBASIC2.77□□□□□ -1.97
LTBRP36941 Y_RNA.488-201ENST00000384403 102 ntBASIC2.77□□□□□ -1.97
LTBRP36941 RNU6-1072P-201ENST00000384703 107 ntBASIC2.77□□□□□ -1.97
LTBRP36941 RNU6-443P-201ENST00000384780 107 ntBASIC2.77□□□□□ -1.97
LTBRP36941 Y_RNA.587-201ENST00000391210 103 ntBASIC2.77□□□□□ -1.97
LTBRP36941 MIR1278-201ENST00000408753 81 ntBASIC2.77□□□□□ -1.97
LTBRP36941 RN7SKP101-201ENST00000411376 320 ntBASIC2.77□□□□□ -1.97
LTBRP36941 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.77□□□□□ -1.97
LTBRP36941 AL353689.1-201ENST00000438895 199 ntBASIC2.77□□□□□ -1.97
LTBRP36941 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.77□□□□□ -1.97
LTBRP36941 UBBP3-201ENST00000445497 241 ntBASIC2.77□□□□□ -1.97
LTBRP36941 RNA5SP320-201ENST00000516263 124 ntBASIC2.77□□□□□ -1.97
LTBRP36941 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.77□□□□□ -1.97
LTBRP36941 AC007229.1-201ENST00000590455 412 ntBASIC2.77□□□□□ -1.97
LTBRP36941 AC073413.2-201ENST00000604332 360 ntBASIC2.77□□□□□ -1.97
LTBRP36941 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.77□□□□□ -1.97
LTBRP36941 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
LTBRP36941 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LTBRP36941 SNORD56.3-201ENST00000363507 71 ntBASIC2.76□□□□□ -1.97
LTBRP36941 Y_RNA.203-201ENST00000364106 102 ntBASIC2.76□□□□□ -1.97
LTBRP36941 RNU1-96P-201ENST00000364163 162 ntBASIC2.76□□□□□ -1.97
LTBRP36941 Y_RNA.215-201ENST00000364204 112 ntBASIC2.76□□□□□ -1.97
LTBRP36941 RNU6-818P-201ENST00000364837 108 ntBASIC2.76□□□□□ -1.97
LTBRP36941 Y_RNA.337-201ENST00000365312 102 ntBASIC2.76□□□□□ -1.97
LTBRP36941 RNU6-643P-201ENST00000384018 107 ntBASIC2.76□□□□□ -1.97
LTBRP36941 RNU6-160P-201ENST00000384591 107 ntBASIC2.76□□□□□ -1.97
LTBRP36941 Y_RNA.622-201ENST00000411091 108 ntBASIC2.76□□□□□ -1.97
LTBRP36941 EDDM3CP-201ENST00000415977 425 ntBASIC2.76□□□□□ -1.97
LTBRP36941 RPS15AP28-201ENST00000435088 386 ntBASIC2.76□□□□□ -1.97
LTBRP36941 AC003982.1-202ENST00000469928 248 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms