Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CENPCP1-201ENST00000533085 2578 ntBASIC2.74□□□□□ -1.97
CNOT4O95628 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CNOT4O95628 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.74□□□□□ -1.97
CNOT4O95628 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CNOT4O95628 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNOT4O95628 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNOT4O95628 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNOT4O95628 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
CNOT4O95628 RNU6-674P-201ENST00000363831 107 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 Y_RNA.251-201ENST00000364551 99 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 RNU6-1325P-201ENST00000364905 105 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 RNU6-597P-201ENST00000365620 102 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 RNA5SP496-201ENST00000391240 109 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 RPL21P3-201ENST00000395517 478 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 AL512604.1-201ENST00000404812 257 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 RN7SKP101-201ENST00000411376 320 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.73□□□□□ -1.97
CNOT4O95628 RNU6-63P-201ENST00000516690 95 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 UBL5P2-201ENST00000583788 219 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 AL031274.2-201ENST00000599419 203 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 AL033523.1-201ENST00000605153 153 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.73□□□□□ -1.97
CNOT4O95628 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 AC006435.5-201ENST00000624486 112 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNOT4O95628 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNOT4O95628 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 MAPK10-266ENST00000641066 6555 ntBASIC2.73□□□□□ -1.97
CNOT4O95628 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CNOT4O95628 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CNOT4O95628 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CNOT4O95628 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNOT4O95628 RNU6-834P-201ENST00000362367 110 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 RNU4-41P-201ENST00000364426 143 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 RNU6-851P-201ENST00000384565 107 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 MIR95-201ENST00000385072 81 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 Y_RNA.587-201ENST00000391210 103 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 RN7SKP284-201ENST00000411002 343 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 AC010154.1-201ENST00000425857 269 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 SNRPGP8-201ENST00000454064 226 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 AC016925.1-201ENST00000458303 298 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 AC010531.2-201ENST00000465012 153 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 RNU6-948P-201ENST00000516374 107 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 RNU6-659P-201ENST00000516454 104 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 SCARNA20.6-201ENST00000517251 106 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 AC018630.3-201ENST00000542637 96 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 MIR378D2-201ENST00000580636 98 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 MIR4672-201ENST00000583126 81 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 AC120024.3-201ENST00000603167 156 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 AC009487.4-201ENST00000624969 3585 ntBASIC2.72□□□□□ -1.97
CNOT4O95628 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CNOT4O95628 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CNOT4O95628 RNY1P11-201ENST00000363759 113 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 SNORA71.1-201ENST00000364523 117 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 RNU6-915P-201ENST00000364943 103 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 RNU6-1235P-201ENST00000384559 107 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 AC008134.1-201ENST00000420943 193 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 RNU6-498P-201ENST00000459468 107 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 RN7SKP179-201ENST00000516126 217 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 AC025647.1-201ENST00000517879 253 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 AC090142.3-201ENST00000519012 385 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 MIR3126-201ENST00000577443 74 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 AL021707.8-201ENST00000609428 183 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
CNOT4O95628 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.71□□□□□ -1.98
CNOT4O95628 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CNOT4O95628 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 Z82209.1-201ENST00000422141 2135 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CNOT4O95628 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CNOT4O95628 AC009487.2-201ENST00000420969 6821 ntBASIC2.71□□□□□ -1.98
CNOT4O95628 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CNOT4O95628 MIR22-201ENST00000362190 85 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNU4-13P-201ENST00000364019 141 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNU6-1082P-201ENST00000364574 107 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNA5SP126-201ENST00000365092 109 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNU6-117P-201ENST00000365415 107 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNU6-546P-201ENST00000383991 107 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 MIR181A2-201ENST00000384863 110 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNA5SP511-201ENST00000410487 115 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 AC245047.4-201ENST00000433189 144 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.7□□□□□ -1.98
CNOT4O95628 AC008885.1-201ENST00000514930 301 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNU1-143P-201ENST00000516296 146 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNU6-197P-201ENST00000516680 100 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 AC015720.1-201ENST00000565251 277 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.7□□□□□ -1.98
CNOT4O95628 U1.23-201ENST00000610293 146 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 AC013412.1-201ENST00000610687 192 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 RNU1-68P-201ENST00000615382 146 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 U1.39-201ENST00000621562 146 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
CNOT4O95628 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CNOT4O95628 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.7□□□□□ -1.98
CNOT4O95628 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CNOT4O95628 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CNOT4O95628 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.7□□□□□ -1.98
CNOT4O95628 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
CNOT4O95628 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CNOT4O95628 RNU6-438P-201ENST00000365561 103 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms