Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTCD1O75127 SNORA9.2-201ENST00000365361 133 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 RNU6-1323P-201ENST00000384025 107 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 RNU6-49P-201ENST00000384256 107 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 SNORA12.1-201ENST00000390873 148 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 RNU6-554P-201ENST00000410466 106 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 Y_RNA.617-201ENST00000410920 90 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 AC008134.1-201ENST00000420943 193 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.71□□□□□ -1.82
PTCD1O75127 RPS29P12-201ENST00000460178 152 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 RN7SL442P-201ENST00000473804 320 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 Y_RNA.692-201ENST00000516627 105 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 AC107016.2-201ENST00000547968 190 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 AL121890.5-201ENST00000620848 304 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.71□□□□□ -1.82
PTCD1O75127 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTCD1O75127 AC080128.1-201ENST00000474389 1917 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PTCD1O75127 RNU4-13P-201ENST00000364019 141 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 RNU6-978P-201ENST00000364371 103 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 MIR196B-201ENST00000384852 84 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 RPL32P35-201ENST00000415214 394 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 AL135786.1-201ENST00000415892 214 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 RPS26P45-201ENST00000471748 340 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 RPS27P22-201ENST00000478056 241 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 RNU7-116P-201ENST00000516940 62 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 AC093331.1-201ENST00000521474 169 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 MIR378D2-201ENST00000580636 98 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTCD1O75127 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTCD1O75127 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTCD1O75127 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PTCD1O75127 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PTCD1O75127 AC096644.4-201ENST00000563417 2912 ntBASIC3.7□□□□□ -1.82
PTCD1O75127 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCD1O75127 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCD1O75127 RNU1-112P-201ENST00000364401 164 ntBASIC3.69□□□□□ -1.82
PTCD1O75127 RNU6-294P-201ENST00000364999 102 ntBASIC3.69□□□□□ -1.82
PTCD1O75127 RNU6-1240P-201ENST00000365155 104 ntBASIC3.69□□□□□ -1.82
PTCD1O75127 RNU6-880P-201ENST00000384526 107 ntBASIC3.69□□□□□ -1.82
PTCD1O75127 MIRLET7F2-201ENST00000385277 83 ntBASIC3.69□□□□□ -1.82
PTCD1O75127 SNORA26.2-201ENST00000390922 122 ntBASIC3.69□□□□□ -1.82
PTCD1O75127 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.69□□□□□ -1.82
PTCD1O75127 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.69□□□□□ -1.82
PTCD1O75127 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTCD1O75127 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTCD1O75127 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCD1O75127 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCD1O75127 AP003122.5-201ENST00000527668 3766 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PTCD1O75127 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCD1O75127 RNU6-309P-201ENST00000364573 106 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 RNU6-1131P-201ENST00000364955 107 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 RNU6-136P-201ENST00000384663 107 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 RNA5SP511-201ENST00000410487 115 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.68□□□□□ -1.82
PTCD1O75127 AL161788.1-201ENST00000441805 169 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 RNU6-437P-201ENST00000459408 95 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 RPL36AP21-201ENST00000490372 323 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 AC023141.11-201ENST00000508864 202 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 AC106754.2-201ENST00000623006 233 ntBASIC3.68□□□□□ -1.82
PTCD1O75127 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCD1O75127 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PTCD1O75127 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PTCD1O75127 AC009487.4-201ENST00000624969 3585 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTCD1O75127 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PTCD1O75127 Y_RNA.120-201ENST00000363304 110 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 SNORA68.1-201ENST00000364537 132 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 AL138878.1-201ENST00000405131 347 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 RNA5SP274-201ENST00000410484 108 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 AC016909.1-201ENST00000415916 166 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 AC009969.1-201ENST00000438726 172 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCD1O75127 CYP2C59P-201ENST00000457790 269 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 Y_RNA.649-201ENST00000459077 103 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCD1O75127 IGKV1-22-201ENST00000524313 326 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 PRELID2P1-201ENST00000552837 301 ntBASIC3.67□□□□□ -1.82
PTCD1O75127 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCD1O75127 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCD1O75127 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCD1O75127 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCD1O75127 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCD1O75127 RNU1-23P-201ENST00000363361 144 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 RNU4-41P-201ENST00000364426 143 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 SNORA51.10-201ENST00000384418 136 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 RNU6-1275P-201ENST00000391087 107 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 AC245047.4-201ENST00000433189 144 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 AC010531.2-201ENST00000465012 153 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.66□□□□□ -1.82
PTCD1O75127 AC091178.2-201ENST00000584401 117 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 AC006435.5-201ENST00000624486 112 ntBASIC3.66□□□□□ -1.82
PTCD1O75127 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTCD1O75127 SNORA72-201ENST00000384339 132 ntBASIC3.65□□□□□ -1.83
PTCD1O75127 HMGN2P32-201ENST00000444648 269 ntBASIC3.65□□□□□ -1.83
PTCD1O75127 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCD1O75127 AC006539.3-201ENST00000454258 129 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms