Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC091167.1-201ENST00000492017 396 ntBASIC6.2□□□□□ -1.42
MSH5O43196 IGLV3-26-201ENST00000520756 302 ntBASIC6.2□□□□□ -1.42
MSH5O43196 MIR4429-201ENST00000580105 73 ntBASIC6.2□□□□□ -1.42
MSH5O43196 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MSH5O43196 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC6.2□□□□□ -1.42
MSH5O43196 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSH5O43196 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MSH5O43196 MIR515-2-201ENST00000384883 83 ntBASIC6.19□□□□□ -1.42
MSH5O43196 MIR515-1-201ENST00000384884 83 ntBASIC6.19□□□□□ -1.42
MSH5O43196 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.19□□□□□ -1.42
MSH5O43196 RPS26P2-201ENST00000440331 348 ntBASIC6.19□□□□□ -1.42
MSH5O43196 RNU6-92P-201ENST00000605893 104 ntBASIC6.19□□□□□ -1.42
MSH5O43196 U6.109-201ENST00000636749 87 ntBASIC6.19□□□□□ -1.42
MSH5O43196 Z97988.1-201ENST00000637697 135 ntBASIC6.19□□□□□ -1.42
MSH5O43196 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC6.19□□□□□ -1.42
MSH5O43196 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MSH5O43196 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MSH5O43196 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MSH5O43196 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MSH5O43196 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSH5O43196 AC025031.4-201ENST00000621248 3271 ntBASIC6.18□□□□□ -1.42
MSH5O43196 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSH5O43196 RPS29P9-201ENST00000440360 171 ntBASIC6.18□□□□□ -1.42
MSH5O43196 RNU7-106P-201ENST00000459514 67 ntBASIC6.18□□□□□ -1.42
MSH5O43196 RNA5SP392-201ENST00000516905 112 ntBASIC6.18□□□□□ -1.42
MSH5O43196 AC022726.1-201ENST00000587475 207 ntBASIC6.18□□□□□ -1.42
MSH5O43196 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSH5O43196 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
MSH5O43196 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
MSH5O43196 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.18□□□□□ -1.42
MSH5O43196 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MSH5O43196 SNORD60.1-201ENST00000362451 73 ntBASIC6.17□□□□□ -1.42
MSH5O43196 AL162591.2-201ENST00000449634 317 ntBASIC6.17□□□□□ -1.42
MSH5O43196 SCARNA22-201ENST00000503991 125 ntBASIC6.17□□□□□ -1.42
MSH5O43196 SUB1P4-201ENST00000566062 339 ntBASIC6.17□□□□□ -1.42
MSH5O43196 MIR3138-201ENST00000585238 82 ntBASIC6.17□□□□□ -1.42
MSH5O43196 AC112200.1-201ENST00000625015 234 ntBASIC6.17□□□□□ -1.42
MSH5O43196 MIR4773-1-201ENST00000637203 78 ntBASIC6.17□□□□□ -1.42
MSH5O43196 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MSH5O43196 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MSH5O43196 AL031595.2-201ENST00000624215 19071 ntBASIC6.17□□□□□ -1.42
MSH5O43196 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
MSH5O43196 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
MSH5O43196 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC6.16□□□□□ -1.42
MSH5O43196 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
MSH5O43196 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.16□□□□□ -1.42
MSH5O43196 WWP1P1-201ENST00000466609 2769 ntBASIC6.16□□□□□ -1.42
MSH5O43196 SNORA7.2-201ENST00000364446 145 ntBASIC6.16□□□□□ -1.42
MSH5O43196 RNU6-546P-201ENST00000383991 107 ntBASIC6.16□□□□□ -1.42
MSH5O43196 SNORA70C-201ENST00000384538 135 ntBASIC6.16□□□□□ -1.42
MSH5O43196 RNA5SP237-201ENST00000410414 113 ntBASIC6.16□□□□□ -1.42
MSH5O43196 RPS27P16-201ENST00000425758 201 ntBASIC6.16□□□□□ -1.42
MSH5O43196 MIR2116-201ENST00000517221 80 ntBASIC6.16□□□□□ -1.42
MSH5O43196 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.16□□□□□ -1.42
MSH5O43196 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
MSH5O43196 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MSH5O43196 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MSH5O43196 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
MSH5O43196 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
MSH5O43196 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MSH5O43196 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.15□□□□□ -1.42
MSH5O43196 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MSH5O43196 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MSH5O43196 RNU6-50P-201ENST00000362356 103 ntBASIC6.15□□□□□ -1.42
MSH5O43196 RNA5SP397-201ENST00000391323 118 ntBASIC6.15□□□□□ -1.42
MSH5O43196 AC244098.3-201ENST00000424803 96 ntBASIC6.15□□□□□ -1.42
MSH5O43196 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC6.15□□□□□ -1.42
MSH5O43196 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC6.15□□□□□ -1.42
MSH5O43196 RNU6-274P-201ENST00000459566 107 ntBASIC6.15□□□□□ -1.42
MSH5O43196 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.15□□□□□ -1.42
MSH5O43196 CYCSP29-201ENST00000533731 318 ntBASIC6.15□□□□□ -1.42
MSH5O43196 MIR7154-201ENST00000620673 73 ntBASIC6.15□□□□□ -1.42
MSH5O43196 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MSH5O43196 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC6.15□□□□□ -1.43
MSH5O43196 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MSH5O43196 Z95331.1-201ENST00000623075 23112 ntBASIC6.14□□□□□ -1.43
MSH5O43196 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
MSH5O43196 RN7SKP132-201ENST00000516001 208 ntBASIC6.14□□□□□ -1.43
MSH5O43196 RNU6-752P-201ENST00000516376 102 ntBASIC6.14□□□□□ -1.43
MSH5O43196 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.14□□□□□ -1.43
MSH5O43196 DLEU2_3.1-201ENST00000620005 73 ntBASIC6.14□□□□□ -1.43
MSH5O43196 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.14□□□□□ -1.43
MSH5O43196 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.14□□□□□ -1.43
MSH5O43196 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC6.14□□□□□ -1.43
MSH5O43196 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MSH5O43196 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.13□□□□□ -1.43
MSH5O43196 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.13□□□□□ -1.43
MSH5O43196 Y_RNA.119-201ENST00000363301 96 ntBASIC6.13□□□□□ -1.43
MSH5O43196 IFNWP4-201ENST00000453148 294 ntBASIC6.13□□□□□ -1.43
MSH5O43196 RNA5SP310-201ENST00000459084 116 ntBASIC6.13□□□□□ -1.43
MSH5O43196 AC114781.5-201ENST00000615297 108 ntBASIC6.13□□□□□ -1.43
MSH5O43196 AL022401.1-201ENST00000619498 108 ntBASIC6.13□□□□□ -1.43
MSH5O43196 AC034229.5-201ENST00000624258 185 ntBASIC6.13□□□□□ -1.43
MSH5O43196 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
MSH5O43196 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
MSH5O43196 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.12□□□□□ -1.43
MSH5O43196 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH5O43196 MIR331-201ENST00000362302 94 ntBASIC6.12□□□□□ -1.43
MSH5O43196 RNU6-833P-201ENST00000363486 107 ntBASIC6.12□□□□□ -1.43
MSH5O43196 MIR136-201ENST00000385207 82 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms