Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
SHOXO15266 MFSD8-233ENST00000641482 4860 ntBASIC2.8□□□□□ -1.96
SHOXO15266 MIR208A-201ENST00000362287 71 ntBASIC2.8□□□□□ -1.96
SHOXO15266 RNA5SP124-201ENST00000362739 110 ntBASIC2.8□□□□□ -1.96
SHOXO15266 VTRNA1-1-201ENST00000363120 99 ntBASIC2.8□□□□□ -1.96
SHOXO15266 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.8□□□□□ -1.96
SHOXO15266 Y_RNA.634-201ENST00000364811 113 ntBASIC2.8□□□□□ -1.96
SHOXO15266 SNORD116-14-201ENST00000383894 92 ntBASIC2.8□□□□□ -1.96
SHOXO15266 SNORD116-17-201ENST00000383929 92 ntBASIC2.8□□□□□ -1.96
SHOXO15266 SNORD116-15-201ENST00000384445 92 ntBASIC2.8□□□□□ -1.96
SHOXO15266 SNORA22C-201ENST00000384614 134 ntBASIC2.8□□□□□ -1.96
SHOXO15266 Y_RNA.542-201ENST00000384641 111 ntBASIC2.8□□□□□ -1.96
SHOXO15266 SNORD116-19-201ENST00000384729 92 ntBASIC2.8□□□□□ -1.96
SHOXO15266 Y_RNA.584-201ENST00000391090 114 ntBASIC2.8□□□□□ -1.96
SHOXO15266 RNA5SP467-201ENST00000391274 118 ntBASIC2.8□□□□□ -1.96
SHOXO15266 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.8□□□□□ -1.96
SHOXO15266 UBBP3-201ENST00000445497 241 ntBASIC2.8□□□□□ -1.96
SHOXO15266 RPL21P10-201ENST00000463521 490 ntBASIC2.8□□□□□ -1.96
SHOXO15266 RNU7-149P-201ENST00000516739 59 ntBASIC2.8□□□□□ -1.96
SHOXO15266 RNU6-826P-201ENST00000516827 104 ntBASIC2.8□□□□□ -1.96
SHOXO15266 RNU7-128P-201ENST00000517247 62 ntBASIC2.8□□□□□ -1.96
SHOXO15266 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.8□□□□□ -1.96
SHOXO15266 AC091178.2-201ENST00000584401 117 ntBASIC2.8□□□□□ -1.96
SHOXO15266 Pinc.1-201ENST00000616452 154 ntBASIC2.8□□□□□ -1.96
SHOXO15266 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHOXO15266 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.79□□□□□ -1.96
SHOXO15266 Y_RNA.127-201ENST00000363386 109 ntBASIC2.79□□□□□ -1.96
SHOXO15266 SNORA8-201ENST00000384574 139 ntBASIC2.79□□□□□ -1.96
SHOXO15266 MIR34B-201ENST00000385076 84 ntBASIC2.79□□□□□ -1.96
SHOXO15266 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SHOXO15266 RNU6-460P-201ENST00000391158 108 ntBASIC2.79□□□□□ -1.96
SHOXO15266 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.79□□□□□ -1.96
SHOXO15266 RN7SKP43-201ENST00000516173 320 ntBASIC2.79□□□□□ -1.96
SHOXO15266 RNU6-1291P-201ENST00000516591 104 ntBASIC2.79□□□□□ -1.96
SHOXO15266 AC087685.1-201ENST00000587507 141 ntBASIC2.79□□□□□ -1.96
SHOXO15266 SCARNA15.3-201ENST00000626315 122 ntBASIC2.79□□□□□ -1.96
SHOXO15266 SCARNA4.1-201ENST00000628597 123 ntBASIC2.79□□□□□ -1.96
SHOXO15266 ZNF271P-202ENST00000465539 1970 ntBASIC2.79□□□□□ -1.96
SHOXO15266 AL365361.1-201ENST00000566942 3481 ntBASIC2.78□□□□□ -1.96
SHOXO15266 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHOXO15266 Y_RNA.267-201ENST00000364679 109 ntBASIC2.78□□□□□ -1.96
SHOXO15266 RNU6-80P-201ENST00000384195 107 ntBASIC2.78□□□□□ -1.96
SHOXO15266 MIR1262-201ENST00000408276 93 ntBASIC2.78□□□□□ -1.96
SHOXO15266 SNORA11.4-201ENST00000408823 129 ntBASIC2.78□□□□□ -1.96
SHOXO15266 Y_RNA.629-201ENST00000411368 105 ntBASIC2.78□□□□□ -1.96
SHOXO15266 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.78□□□□□ -1.96
SHOXO15266 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHOXO15266 SNRPGP10-201ENST00000432323 225 ntBASIC2.78□□□□□ -1.96
SHOXO15266 SNORA74D-201ENST00000516404 141 ntBASIC2.78□□□□□ -1.96
SHOXO15266 RNU2-56P-201ENST00000516826 190 ntBASIC2.78□□□□□ -1.96
SHOXO15266 RNU6-365P-201ENST00000517113 106 ntBASIC2.78□□□□□ -1.96
SHOXO15266 AP002004.2-201ENST00000531656 154 ntBASIC2.78□□□□□ -1.96
SHOXO15266 Y_RNA.757-201ENST00000578934 114 ntBASIC2.78□□□□□ -1.96
SHOXO15266 MIR4298-201ENST00000584380 73 ntBASIC2.78□□□□□ -1.96
SHOXO15266 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.78□□□□□ -1.96
SHOXO15266 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHOXO15266 AC017071.1-201ENST00000564407 2204 ntBASIC2.78□□□□□ -1.96
SHOXO15266 AC073346.2-201ENST00000624724 2058 ntBASIC2.78□□□□□ -1.96
SHOXO15266 AC108206.1-201ENST00000570186 4159 ntBASIC2.78□□□□□ -1.97
SHOXO15266 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SHOXO15266 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.77□□□□□ -1.97
SHOXO15266 SNORA71.3-201ENST00000362582 128 ntBASIC2.77□□□□□ -1.97
SHOXO15266 Y_RNA.71-201ENST00000362892 104 ntBASIC2.77□□□□□ -1.97
SHOXO15266 RNU6-1290P-201ENST00000362957 109 ntBASIC2.77□□□□□ -1.97
SHOXO15266 RNU6-23P-201ENST00000363283 107 ntBASIC2.77□□□□□ -1.97
SHOXO15266 SNORD114-6-201ENST00000364393 72 ntBASIC2.77□□□□□ -1.97
SHOXO15266 Y_RNA.251-201ENST00000364551 99 ntBASIC2.77□□□□□ -1.97
SHOXO15266 Y_RNA.253-201ENST00000364562 112 ntBASIC2.77□□□□□ -1.97
SHOXO15266 RNU6-915P-201ENST00000364943 103 ntBASIC2.77□□□□□ -1.97
SHOXO15266 MIR29C-201ENST00000385231 88 ntBASIC2.77□□□□□ -1.97
SHOXO15266 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.77□□□□□ -1.97
SHOXO15266 RPS26P45-201ENST00000471748 340 ntBASIC2.77□□□□□ -1.97
SHOXO15266 AP004217.1-201ENST00000480579 346 ntBASIC2.77□□□□□ -1.97
SHOXO15266 RNU6-1333P-201ENST00000516162 93 ntBASIC2.77□□□□□ -1.97
SHOXO15266 AL359881.1-201ENST00000602916 267 ntBASIC2.77□□□□□ -1.97
SHOXO15266 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.77□□□□□ -1.97
SHOXO15266 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.77□□□□□ -1.97
SHOXO15266 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SHOXO15266 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHOXO15266 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SHOXO15266 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
SHOXO15266 Y_RNA.91-201ENST00000363042 107 ntBASIC2.76□□□□□ -1.97
SHOXO15266 RNU6-1082P-201ENST00000364574 107 ntBASIC2.76□□□□□ -1.97
SHOXO15266 RNA5SP205-201ENST00000364653 136 ntBASIC2.76□□□□□ -1.97
SHOXO15266 AL590004.2-201ENST00000404787 371 ntBASIC2.76□□□□□ -1.97
SHOXO15266 RNU6-735P-201ENST00000410612 107 ntBASIC2.76□□□□□ -1.97
SHOXO15266 AL109933.2-201ENST00000452651 260 ntBASIC2.76□□□□□ -1.97
SHOXO15266 RNU1-95P-201ENST00000516357 160 ntBASIC2.76□□□□□ -1.97
SHOXO15266 RNU6-504P-201ENST00000516568 104 ntBASIC2.76□□□□□ -1.97
SHOXO15266 RNU1-128P-201ENST00000516704 160 ntBASIC2.76□□□□□ -1.97
SHOXO15266 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.76□□□□□ -1.97
SHOXO15266 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.76□□□□□ -1.97
SHOXO15266 AC007179.3-201ENST00000604976 235 ntBASIC2.76□□□□□ -1.97
SHOXO15266 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SHOXO15266 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHOXO15266 RNA5SP493-201ENST00000364115 91 ntBASIC2.75□□□□□ -1.97
SHOXO15266 Y_RNA.218-201ENST00000364218 104 ntBASIC2.75□□□□□ -1.97
SHOXO15266 AL117342.1-201ENST00000404861 406 ntBASIC2.75□□□□□ -1.97
SHOXO15266 CYCSP4-201ENST00000429682 331 ntBASIC2.75□□□□□ -1.97
SHOXO15266 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms