Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR4753-201ENST00000585119 83 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 ZNF658B-202ENST00000615961 3375 ntBASIC3.08□□□□□ -1.92
PDLIM7Q9NR12 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 SNORD114-7-201ENST00000362520 77 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 RNU6-461P-201ENST00000364195 107 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 SNORD56.5-201ENST00000364281 72 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 Y_RNA.337-201ENST00000365312 102 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 SNORD116-13-201ENST00000384408 92 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 MIR15B-201ENST00000385045 98 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 AL606845.1-201ENST00000404881 255 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 SNORA36B-201ENST00000410438 131 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 AC092427.1-202ENST00000430569 476 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 AC003982.1-202ENST00000469928 248 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 AC023141.11-201ENST00000508864 202 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 RNU7-115P-201ENST00000516433 55 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 MIR548AY-201ENST00000617669 107 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 AC080128.1-201ENST00000474389 1917 ntBASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDLIM7Q9NR12 RNU6-199P-201ENST00000362954 107 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 MIR518C-201ENST00000384822 101 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 FO393413.1-201ENST00000402892 195 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 MTND4LP9-201ENST00000427694 174 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 AC074290.1-201ENST00000448883 135 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 AC016717.1-201ENST00000448918 286 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 ATP5EP1-201ENST00000510257 156 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 RNU6-56P-201ENST00000516986 93 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 AC027419.1-201ENST00000522976 328 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 AC105245.1-201ENST00000581934 244 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 MIR3117-201ENST00000584034 78 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 AL356280.1-201ENST00000603614 379 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 snoZ196.1-201ENST00000625269 89 ntBASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PDLIM7Q9NR12 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 SNORA27.1-201ENST00000362604 124 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 RNU6-234P-201ENST00000365229 104 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 RNU6-407P-201ENST00000365280 104 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 RNU6-643P-201ENST00000384018 107 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 MIR181A2-201ENST00000384863 110 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 RNU6-1228P-201ENST00000391014 107 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 HSPE1P13-201ENST00000451143 297 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 SNORD65B-201ENST00000459126 73 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 AC114982.1-201ENST00000469402 321 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 AC092185.1-201ENST00000491371 97 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 RNU6-971P-201ENST00000516920 106 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 AC109329.2-201ENST00000519658 482 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 AC023043.3-201ENST00000593113 385 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 AL159152.1-201ENST00000635019 2587 ntBASIC3.05□□□□□ -1.92
PDLIM7Q9NR12 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 RNU1-72P-201ENST00000362976 153 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 RNU6-975P-201ENST00000384296 105 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 SNORD37.2-201ENST00000391075 66 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 RNU6-57P-201ENST00000411348 103 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 AL445687.1-201ENST00000439946 251 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 RPS26P55-201ENST00000471178 356 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 AC010598.1-201ENST00000510378 103 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 ZNF861P-201ENST00000588126 639 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 AC012640.5-201ENST00000623897 319 ntBASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PDLIM7Q9NR12 AL356292.1-201ENST00000283110 373 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 MIR26A1-201ENST00000362205 77 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 RNU6-271P-201ENST00000363858 105 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 Y_RNA.261-201ENST00000364631 102 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 MIR218-1-201ENST00000384999 110 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 MIR181B1-201ENST00000385240 110 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 AC008267.6-201ENST00000441664 139 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 RNU6-221P-201ENST00000459541 99 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 RPS29P21-201ENST00000496272 170 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 AC096725.1-201ENST00000514266 313 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 AC112693.2-201ENST00000556538 232 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 AP003357.1-201ENST00000604497 148 ntBASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM7Q9NR12 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 ZNF702P-202ENST00000434269 1966 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 SNORD31B-201ENST00000364977 69 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 RNU6-728P-201ENST00000365375 104 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 Y_RNA.542-201ENST00000384641 111 ntBASIC3.02□□□□□ -1.93
PDLIM7Q9NR12 RNU6-1328P-201ENST00000410938 106 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms