Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC073325.2-201ENST00000339545 159 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 MIR422A-201ENST00000362286 90 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 SNORA63.4-201ENST00000362763 126 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-674P-201ENST00000363831 107 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-153P-201ENST00000364422 104 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 AC022018.1-201ENST00000430685 241 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 AC016925.1-201ENST00000458303 298 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 AC006483.1-201ENST00000487308 313 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-197P-201ENST00000516680 100 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 RPL23AP91-201ENST00000569211 455 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 MIR3199-1-201ENST00000582434 88 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 MIR3117-201ENST00000584034 78 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 AC093732.2-201ENST00000607950 274 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 MIR7515-201ENST00000637837 67 ntBASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
SEC61A2Q9H9S3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 SNORA71.1-201ENST00000364523 117 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-117P-201ENST00000365415 107 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-597P-201ENST00000365620 102 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 CD24P4-201ENST00000382840 243 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-429P-201ENST00000384582 108 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 AC245047.4-201ENST00000433189 144 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-498P-201ENST00000459468 107 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 SNORD59.2-201ENST00000516873 68 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RNA5SP490-201ENST00000517141 136 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 SNORA31.26-201ENST00000517250 137 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 AL021707.8-201ENST00000609428 183 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 MIR6129-201ENST00000616087 109 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 AC007318.2-201ENST00000620999 243 ntBASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SEC61A2Q9H9S3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.98
SEC61A2Q9H9S3 U8.1-201ENST00000362843 134 ntBASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-484P-201ENST00000384016 107 ntBASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 AC008134.1-201ENST00000420943 193 ntBASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 RPL39P40-201ENST00000445481 146 ntBASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 PRELID2P1-201ENST00000552837 301 ntBASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 MIR6733-201ENST00000635723 61 ntBASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 Z82209.1-201ENST00000422141 2135 ntBASIC2.65□□□□□ -1.99
SEC61A2Q9H9S3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 SNORA25.7-201ENST00000364375 127 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 SNORA72-201ENST00000384339 132 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-1064P-201ENST00000410626 104 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 RNU2-32P-201ENST00000411193 191 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 Z92545.1-201ENST00000411782 234 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 RPS4XP11-201ENST00000446897 772 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 RPL27AP5-201ENST00000469428 449 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 RN7SKP179-201ENST00000516126 217 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 RN7SKP282-201ENST00000516824 299 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 RNU7-172P-201ENST00000517125 64 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 AC090049.2-201ENST00000550377 109 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 MTND5P34-201ENST00000568888 325 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 MIR4438-201ENST00000585271 93 ntBASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SEC61A2Q9H9S3 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 RNU1-22P-201ENST00000363334 158 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-978P-201ENST00000364371 103 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 RNU6-546P-201ENST00000383991 107 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 RN7SKP220-201ENST00000410611 288 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 RNU2-70P-201ENST00000410718 179 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 AL158823.1-201ENST00000418441 478 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 RNU5E-3P-201ENST00000515913 68 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 Y_RNA.757-201ENST00000578934 114 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 AC090115.4-201ENST00000609970 188 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 uc_338.4-201ENST00000616635 176 ntBASIC2.63□□□□□ -1.99
SEC61A2Q9H9S3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms