Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 MIR372-201ENST00000362225 67 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 RNU1-105P-201ENST00000363470 161 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 SNORA67.4-201ENST00000384688 142 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 RNA5SP317-201ENST00000410176 116 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 RNA5SP311-201ENST00000411290 116 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 HSPE1P9-201ENST00000440046 311 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 RN7SL303P-201ENST00000469773 251 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 RNA5SP315-201ENST00000516340 116 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 RNA5SP312-201ENST00000517068 116 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 AC010300.1-201ENST00000600671 5134 ntBASIC6.78□□□□□ -1.32
SENP3Q9H4L4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SENP3Q9H4L4 RNA5SP283-201ENST00000365604 119 ntBASIC6.77□□□□□ -1.33
SENP3Q9H4L4 MIR592-201ENST00000384959 97 ntBASIC6.77□□□□□ -1.33
SENP3Q9H4L4 AC019129.1-201ENST00000403786 261 ntBASIC6.77□□□□□ -1.33
SENP3Q9H4L4 SNORD63B-201ENST00000411005 70 ntBASIC6.77□□□□□ -1.33
SENP3Q9H4L4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.77□□□□□ -1.33
SENP3Q9H4L4 AL121932.1-201ENST00000605542 214 ntBASIC6.77□□□□□ -1.33
SENP3Q9H4L4 uc_338.10-201ENST00000621872 182 ntBASIC6.77□□□□□ -1.33
SENP3Q9H4L4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SENP3Q9H4L4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
SENP3Q9H4L4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SENP3Q9H4L4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 RN7SKP177-201ENST00000410567 355 ntBASIC6.76□□□□□ -1.33
SENP3Q9H4L4 AC244098.3-201ENST00000424803 96 ntBASIC6.76□□□□□ -1.33
SENP3Q9H4L4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 CYP2C59P-201ENST00000457790 269 ntBASIC6.76□□□□□ -1.33
SENP3Q9H4L4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 AC105129.1-201ENST00000560250 297 ntBASIC6.76□□□□□ -1.33
SENP3Q9H4L4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SENP3Q9H4L4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 MIR95-201ENST00000385072 81 ntBASIC6.75□□□□□ -1.33
SENP3Q9H4L4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC6.75□□□□□ -1.33
SENP3Q9H4L4 RNA5SP38-201ENST00000410750 119 ntBASIC6.75□□□□□ -1.33
SENP3Q9H4L4 RNU6-1194P-201ENST00000516208 104 ntBASIC6.75□□□□□ -1.33
SENP3Q9H4L4 RNU6-667P-201ENST00000517186 102 ntBASIC6.75□□□□□ -1.33
SENP3Q9H4L4 AL162274.2-201ENST00000614406 332 ntBASIC6.75□□□□□ -1.33
SENP3Q9H4L4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC6.75□□□□□ -1.33
SENP3Q9H4L4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
SENP3Q9H4L4 Y_RNA.99-201ENST00000363138 105 ntBASIC6.74□□□□□ -1.33
SENP3Q9H4L4 RNA5SP360-201ENST00000516555 118 ntBASIC6.74□□□□□ -1.33
SENP3Q9H4L4 SNORA48.11-201ENST00000517015 89 ntBASIC6.74□□□□□ -1.33
SENP3Q9H4L4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.74□□□□□ -1.33
SENP3Q9H4L4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.74□□□□□ -1.33
SENP3Q9H4L4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
SENP3Q9H4L4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SENP3Q9H4L4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.74□□□□□ -1.33
SENP3Q9H4L4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.73□□□□□ -1.33
SENP3Q9H4L4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SENP3Q9H4L4 RNU6-35P-201ENST00000384530 107 ntBASIC6.73□□□□□ -1.33
SENP3Q9H4L4 MIR526A1-201ENST00000384897 85 ntBASIC6.73□□□□□ -1.33
SENP3Q9H4L4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SENP3Q9H4L4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC6.73□□□□□ -1.33
SENP3Q9H4L4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SENP3Q9H4L4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SENP3Q9H4L4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SENP3Q9H4L4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SENP3Q9H4L4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 RNU6-664P-201ENST00000362381 107 ntBASIC6.72□□□□□ -1.33
SENP3Q9H4L4 RNA5SP167-201ENST00000365461 116 ntBASIC6.72□□□□□ -1.33
SENP3Q9H4L4 MIR483-201ENST00000385070 76 ntBASIC6.72□□□□□ -1.33
SENP3Q9H4L4 RNU6-1052P-201ENST00000411398 104 ntBASIC6.72□□□□□ -1.33
SENP3Q9H4L4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 RN7SL197P-201ENST00000466981 299 ntBASIC6.72□□□□□ -1.33
SENP3Q9H4L4 RN7SL441P-201ENST00000492388 296 ntBASIC6.72□□□□□ -1.33
SENP3Q9H4L4 RNU6-719P-201ENST00000516671 104 ntBASIC6.72□□□□□ -1.33
SENP3Q9H4L4 RNU11-2P-201ENST00000516898 142 ntBASIC6.72□□□□□ -1.33
SENP3Q9H4L4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SENP3Q9H4L4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.71□□□□□ -1.33
SENP3Q9H4L4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.71□□□□□ -1.33
SENP3Q9H4L4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
SENP3Q9H4L4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SENP3Q9H4L4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.71□□□□□ -1.34
SENP3Q9H4L4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SENP3Q9H4L4 RNU6-930P-201ENST00000390938 100 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms