Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 Y_RNA.525-201ENST00000384570 113 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 MIR1283-1-201ENST00000408494 87 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 RNU2-63P-201ENST00000410792 194 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 AC105272.1-201ENST00000438604 198 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 AC016717.1-201ENST00000448918 286 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 RPS27P1-201ENST00000450552 247 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 RNU4-57P-201ENST00000515980 135 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 RNU6-63P-201ENST00000516690 95 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 AC079600.2-201ENST00000550076 130 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF38Q9H0F5 MIR4753-201ENST00000585119 83 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
RNF38Q9H0F5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
RNF38Q9H0F5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF38Q9H0F5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF38Q9H0F5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.99□□□□□ -1.93
RNF38Q9H0F5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.99□□□□□ -1.93
RNF38Q9H0F5 SNORA9.2-201ENST00000365361 133 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 Y_RNA.393-201ENST00000383936 102 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 RNU6-1274P-201ENST00000384557 107 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 RNU6-57P-201ENST00000411348 103 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 AL161788.1-201ENST00000441805 169 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 AC108938.1-201ENST00000451204 136 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 RN7SL633P-201ENST00000488974 297 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 RPL23AP54-201ENST00000495129 419 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 AP001328.1-201ENST00000528550 176 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 AC107016.2-201ENST00000547968 190 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 MIR5688-201ENST00000580619 83 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 AC023043.3-201ENST00000593113 385 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 POLR3GP1-201ENST00000594073 261 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 RPL17P51-201ENST00000605218 238 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 AL449363.1-201ENST00000617815 186 ntBASIC2.99□□□□□ -1.93
RNF38Q9H0F5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RNF38Q9H0F5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
RNF38Q9H0F5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF38Q9H0F5 SNORA27.1-201ENST00000362604 124 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 SNORD45.3-201ENST00000363836 72 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 RNU6-944P-201ENST00000364023 107 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 RNU6-1336P-201ENST00000383886 109 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 AL512604.1-201ENST00000404812 257 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 RNU7-107P-201ENST00000459121 61 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 ATP5EP1-201ENST00000510257 156 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF38Q9H0F5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.98□□□□□ -1.93
RNF38Q9H0F5 AC006023.1-201ENST00000603944 259 ntBASIC2.98□□□□□ -1.93
RNF38Q9H0F5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF38Q9H0F5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF38Q9H0F5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RNF38Q9H0F5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF38Q9H0F5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RNF38Q9H0F5 Y_RNA.587-201ENST00000391210 103 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 RNU2-52P-201ENST00000410680 190 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RNF38Q9H0F5 AC003685.2-201ENST00000422795 395 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 AC087499.2-201ENST00000432861 149 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 AC104389.3-201ENST00000445629 235 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 SNORD65B-201ENST00000459126 73 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 RPS26P55-201ENST00000471178 356 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 RPL23AP94-201ENST00000512518 302 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF38Q9H0F5 AC127455.1-201ENST00000565496 145 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 MIR3646-201ENST00000578301 84 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF38Q9H0F5 MIR4672-201ENST00000583126 81 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 AP003357.1-201ENST00000604497 148 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 snoZ196.1-201ENST00000625269 89 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 AL355596.1-201ENST00000565399 3996 ntBASIC2.97□□□□□ -1.93
RNF38Q9H0F5 RNU6-1082P-201ENST00000364574 107 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 Y_RNA.294-201ENST00000364916 102 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 RNU6-915P-201ENST00000364943 103 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 MIR95-201ENST00000385072 81 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RNF38Q9H0F5 SNORA11.2-201ENST00000408318 127 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 MIR1294-201ENST00000408503 142 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 MIR1278-201ENST00000408753 81 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 AL135786.1-201ENST00000415892 214 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
RNF38Q9H0F5 RPL12P50-201ENST00000603116 116 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 AL355297.2-201ENST00000604792 129 ntBASIC2.96□□□□□ -1.94
RNF38Q9H0F5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.96□□□□□ -1.94
RNF38Q9H0F5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RNF38Q9H0F5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF38Q9H0F5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF38Q9H0F5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF38Q9H0F5 AC108206.1-201ENST00000570186 4159 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RNU1-112P-201ENST00000364401 164 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RNU6-153P-201ENST00000364422 104 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RNU4-41P-201ENST00000364426 143 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RNA5SP125-201ENST00000364843 120 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 MIR181A2-201ENST00000384863 110 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 SNORA75.5-201ENST00000391291 81 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 MIR300-201ENST00000401138 83 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 HSPE1P13-201ENST00000451143 297 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RNU6-437P-201ENST00000459408 95 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RNA5SP20-201ENST00000515976 84 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RN7SKP43-201ENST00000516173 320 ntBASIC2.95□□□□□ -1.94
RNF38Q9H0F5 RNA5SP76-201ENST00000516277 87 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms