Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP9-4Q9BYQ2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP9-4Q9BYQ2 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP9-4Q9BYQ2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 RNA5SP477-201ENST00000362639 119 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 RNU1-134P-201ENST00000362935 165 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 RNU105B-201ENST00000364478 208 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 RNA5SP500-201ENST00000364486 119 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 SNORA43.1-201ENST00000364863 140 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 SNORA51.9-201ENST00000384295 124 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC245096.1-201ENST00000413104 546 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 PPIAP20-201ENST00000449839 135 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC068228.1-201ENST00000461723 211 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 RN7SL442P-201ENST00000473804 320 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AP004217.1-201ENST00000480579 346 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 PPP1R11P1-201ENST00000486095 376 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 RNU1-45P-201ENST00000517191 141 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 RNU7-161P-201ENST00000517289 62 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AP005639.1-201ENST00000526939 192 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 MIR3189-201ENST00000578735 73 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 MIR4443-201ENST00000585052 53 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AL513218.1-201ENST00000606527 391 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 RN7SL261P-201ENST00000613441 282 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC245014.3-201ENST00000618589 347 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC024884.1-201ENST00000620583 399 ntBASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP9-4Q9BYQ2 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AL117339.4-201ENST00000608335 7063 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 SNORA27.2-201ENST00000363365 126 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 SNORD115-24-201ENST00000363528 82 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 Y_RNA.260-201ENST00000364628 101 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 RNA5SP224-201ENST00000365069 126 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 Y_RNA.335-201ENST00000365299 96 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 MIR130B-202ENST00000385018 82 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 SNORA77.2-201ENST00000408571 112 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC003685.2-201ENST00000422795 395 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC002429.1-201ENST00000437672 148 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 FTLP8-201ENST00000446770 267 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 RN7SL594P-201ENST00000470590 287 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 SNORA31.2-201ENST00000516019 134 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 SCARNA21.2-201ENST00000516600 166 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 SCARNA16.5-201ENST00000517114 183 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC027667.1-201ENST00000545814 304 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC026271.5-201ENST00000577873 130 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 MIR4635-201ENST00000583759 79 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC027229.1-201ENST00000583887 253 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC011445.2-201ENST00000599274 173 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AL645939.4-201ENST00000604495 135 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC243829.6-201ENST00000612652 106 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 MIR6729-201ENST00000618194 65 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 AC022513.1-201ENST00000624512 117 ntBASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP9-4Q9BYQ2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.78□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 682.9 ms