Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 Y_RNA.242-201ENST00000364473 110 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 SNORA44-201ENST00000384584 132 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HHIPQ96QV1 MIR1253-201ENST00000408273 105 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 Y_RNA.617-201ENST00000410920 90 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 RNU6-1328P-201ENST00000410938 106 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 RNA5SP127-201ENST00000411051 133 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 MLLT10P1-201ENST00000418346 262 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 ARF4P2-201ENST00000430209 526 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 RN7SL330P-201ENST00000469709 307 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 Y_RNA.690-201ENST00000516603 95 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 RNU7-149P-201ENST00000516739 59 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 SNORA48.11-201ENST00000517015 89 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 RNU1-104P-201ENST00000517280 175 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 MIR3117-201ENST00000584034 78 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 AL356280.1-201ENST00000603614 379 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 AL033523.1-201ENST00000605153 153 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 MIR7106-201ENST00000612419 65 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 U2.20-201ENST00000613956 192 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.32□□□□□ -1.88
HHIPQ96QV1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 Pinc.1-201ENST00000616452 154 ntBASIC3.32□□□□□ -1.88
HHIPQ96QV1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HHIPQ96QV1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HHIPQ96QV1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HHIPQ96QV1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HHIPQ96QV1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.32□□□□□ -1.88
HHIPQ96QV1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HHIPQ96QV1 AC103988.1-201ENST00000566382 2177 ntBASIC3.31□□□□□ -1.88
HHIPQ96QV1 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
HHIPQ96QV1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HHIPQ96QV1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
HHIPQ96QV1 MTATP6P21-201ENST00000440681 189 ntBASIC3.31□□□□□ -1.88
HHIPQ96QV1 SNORA18.4-201ENST00000516440 124 ntBASIC3.31□□□□□ -1.88
HHIPQ96QV1 SNORA70.19-201ENST00000516717 90 ntBASIC3.31□□□□□ -1.88
HHIPQ96QV1 RNU6-965P-201ENST00000516721 96 ntBASIC3.31□□□□□ -1.88
HHIPQ96QV1 RNU6-365P-201ENST00000517113 106 ntBASIC3.31□□□□□ -1.88
HHIPQ96QV1 MIR3199-1-201ENST00000582434 88 ntBASIC3.31□□□□□ -1.88
HHIPQ96QV1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.88
HHIPQ96QV1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HHIPQ96QV1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HHIPQ96QV1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HHIPQ96QV1 SNORA5B-201ENST00000363786 132 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 RNU1-96P-201ENST00000364163 162 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 SNORA68.1-201ENST00000364537 132 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 SNORD58C-201ENST00000365223 64 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 MIR891A-201ENST00000401237 79 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 FO393413.1-201ENST00000402892 195 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 AL031121.1-201ENST00000406553 254 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 AC006539.3-201ENST00000454258 129 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 CKS1BP2-201ENST00000497342 240 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.3□□□□□ -1.88
HHIPQ96QV1 PRELID2P1-201ENST00000552837 301 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.3□□□□□ -1.88
HHIPQ96QV1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HHIPQ96QV1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HHIPQ96QV1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
HHIPQ96QV1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HHIPQ96QV1 AC063976.4-201ENST00000421971 163 ntBASIC3.29□□□□□ -1.88
HHIPQ96QV1 RPS26P45-201ENST00000471748 340 ntBASIC3.29□□□□□ -1.88
HHIPQ96QV1 RNU6-504P-201ENST00000516568 104 ntBASIC3.29□□□□□ -1.88
HHIPQ96QV1 RNU6-1096P-201ENST00000517089 102 ntBASIC3.29□□□□□ -1.88
HHIPQ96QV1 RNU2-60P-201ENST00000517290 128 ntBASIC3.29□□□□□ -1.88
HHIPQ96QV1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HHIPQ96QV1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HHIPQ96QV1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
HHIPQ96QV1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HHIPQ96QV1 RNU1-70P-201ENST00000362618 164 ntBASIC3.28□□□□□ -1.88
HHIPQ96QV1 Y_RNA.66-201ENST00000362862 102 ntBASIC3.28□□□□□ -1.88
HHIPQ96QV1 Y_RNA.346-201ENST00000365385 112 ntBASIC3.28□□□□□ -1.88
HHIPQ96QV1 AC018634.1-201ENST00000437554 401 ntBASIC3.28□□□□□ -1.88
HHIPQ96QV1 SNORD33.1-201ENST00000516213 88 ntBASIC3.28□□□□□ -1.88
HHIPQ96QV1 RNU6-1061P-201ENST00000516530 99 ntBASIC3.28□□□□□ -1.88
HHIPQ96QV1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HHIPQ96QV1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HHIPQ96QV1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HHIPQ96QV1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HHIPQ96QV1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
HHIPQ96QV1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HHIPQ96QV1 RNU6-1298P-201ENST00000362456 101 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 RNU6-1292P-201ENST00000383856 107 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 MIRLET7F2-201ENST00000385277 83 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.27□□□□□ -1.89
HHIPQ96QV1 RPS15AP28-201ENST00000435088 386 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 RNU7-99P-201ENST00000516271 62 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 AL358944.1-201ENST00000528537 144 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 MIR3613-201ENST00000579844 87 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 AC087685.1-201ENST00000587507 141 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 AC007229.1-201ENST00000590455 412 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.27□□□□□ -1.89
HHIPQ96QV1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.27□□□□□ -1.89
HHIPQ96QV1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HHIPQ96QV1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.27□□□□□ -1.89
HHIPQ96QV1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.26□□□□□ -1.89
HHIPQ96QV1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
HHIPQ96QV1 Y_RNA.43-201ENST00000362670 111 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 Y_RNA.52-201ENST00000362760 96 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 Y_RNA.486-201ENST00000384398 107 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 MIR548A3-201ENST00000385297 97 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms