Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-235P-201ENST00000362644 107 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 SNORD56.5-201ENST00000364281 72 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 SNORD114-30-201ENST00000364448 72 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 U8.7-201ENST00000364940 136 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 AL606845.1-201ENST00000404881 255 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 AIMP1P2-201ENST00000425294 312 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 RN7SL297P-201ENST00000483161 293 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 RPS27AP10-201ENST00000496103 208 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 RNU5E-3P-201ENST00000515913 68 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 MTND5P34-201ENST00000568888 325 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 AC009163.5-201ENST00000575421 637 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 MIR5688-201ENST00000580619 83 ntBASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.97□□□□□ -1.93
SH3RF3Q8TEJ3 MIR627-201ENST00000384979 97 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-750P-201ENST00000390946 107 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 AL359511.1-201ENST00000402970 211 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 CYCSP49-201ENST00000420810 319 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 BPY2DP-201ENST00000422208 265 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 RNU7-141P-201ENST00000459304 62 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 MRPS36P2-201ENST00000512569 299 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-772P-201ENST00000516042 105 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-581P-201ENST00000516214 105 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 CYP4A27P-201ENST00000567218 190 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 AC090897.2-201ENST00000581715 130 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 AC108081.1-201ENST00000604358 221 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 MIR3199-2-201ENST00000636243 86 ntBASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.96□□□□□ -1.94
SH3RF3Q8TEJ3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 SNORD87-201ENST00000364849 89 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 SNORA3.2-201ENST00000408221 125 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 SNORD88.1-201ENST00000408684 91 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 RNA5SP390-201ENST00000410191 113 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 RNU4-43P-201ENST00000410628 137 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 Y_RNA.630-201ENST00000411370 108 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 RN7SL636P-201ENST00000497504 294 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 RNU1-41P-201ENST00000516161 162 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 RNU1-48P-201ENST00000516400 162 ntBASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SH3RF3Q8TEJ3 AC069528.2-201ENST00000624849 1991 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 SNORA75.5-201ENST00000391291 81 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 FO393413.1-201ENST00000402892 195 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 MIR1278-201ENST00000408753 81 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 AC023141.4-201ENST00000412031 328 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 RPS27P1-201ENST00000450552 247 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 RPS29P20-201ENST00000489592 171 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 SNORD33.1-201ENST00000516213 88 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 RNA5SP24-201ENST00000516478 95 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 AC103810.1-201ENST00000579873 453 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 AC064859.1-201ENST00000624741 174 ntBASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SH3RF3Q8TEJ3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 U3.9-201ENST00000363823 204 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RNA5SP456-201ENST00000364002 114 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 SNORA68.1-201ENST00000364537 132 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-487P-201ENST00000365430 104 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 MIR208B-201ENST00000401172 77 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 CBX3P9-201ENST00000402326 552 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 AL512604.1-201ENST00000404812 257 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-710P-201ENST00000410424 105 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RNU2-49P-201ENST00000410666 184 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RNA5SP492-201ENST00000411330 114 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 HMGN2P10-201ENST00000448085 265 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 SNORD19.2-201ENST00000516978 73 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 MIR3121-201ENST00000579680 77 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 MIR3616-201ENST00000584070 92 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 AC120024.3-201ENST00000603167 156 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 AC046143.2-201ENST00000609789 160 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 snoZ196.1-201ENST00000625269 89 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 SNORD98-201ENST00000636377 67 ntBASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SH3RF3Q8TEJ3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.92□□□□□ -1.94
SH3RF3Q8TEJ3 RNU6-728P-201ENST00000365375 104 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms