Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF135Q8IUD6 AC023141.11-201ENST00000508864 202 ntBASIC3.79□□□□□ -1.8
RNF135Q8IUD6 RNU7-149P-201ENST00000516739 59 ntBASIC3.79□□□□□ -1.8
RNF135Q8IUD6 RNU1-104P-201ENST00000517280 175 ntBASIC3.79□□□□□ -1.8
RNF135Q8IUD6 MIR4662B-201ENST00000579498 81 ntBASIC3.79□□□□□ -1.8
RNF135Q8IUD6 Pinc.1-201ENST00000616452 154 ntBASIC3.79□□□□□ -1.8
RNF135Q8IUD6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF135Q8IUD6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RNF135Q8IUD6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
RNF135Q8IUD6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF135Q8IUD6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF135Q8IUD6 AL136360.1-201ENST00000503377 1900 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RNU4-35P-201ENST00000362588 141 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RNA5SP374-201ENST00000362939 125 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RNU6-1138P-201ENST00000365359 106 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 MIR570-201ENST00000384917 97 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 MIR624-201ENST00000385217 97 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RNA5SP127-201ENST00000411051 133 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 AC123900.1-201ENST00000420390 96 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 S100A11P2-201ENST00000467589 312 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 OR9P1P-201ENST00000496431 281 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 AC093259.1-201ENST00000509755 300 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RN7SKP43-201ENST00000516173 320 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RNU6-970P-201ENST00000516312 107 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RNU6-856P-201ENST00000516959 98 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 JPX_2.1-201ENST00000614161 69 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 U6.73-201ENST00000619194 103 ntBASIC3.78□□□□□ -1.8
RNF135Q8IUD6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF135Q8IUD6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
RNF135Q8IUD6 MIR95-201ENST00000385072 81 ntBASIC3.77□□□□□ -1.81
RNF135Q8IUD6 CALM2P4-201ENST00000430810 426 ntBASIC3.77□□□□□ -1.81
RNF135Q8IUD6 CYP2C59P-201ENST00000457790 269 ntBASIC3.77□□□□□ -1.81
RNF135Q8IUD6 RN7SL93P-201ENST00000463035 293 ntBASIC3.77□□□□□ -1.81
RNF135Q8IUD6 RN7SL504P-201ENST00000494496 287 ntBASIC3.77□□□□□ -1.81
RNF135Q8IUD6 SNORA70.18-201ENST00000516696 98 ntBASIC3.77□□□□□ -1.81
RNF135Q8IUD6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF135Q8IUD6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF135Q8IUD6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF135Q8IUD6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF135Q8IUD6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNU1-23P-201ENST00000363361 144 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 SNORA80A-201ENST00000363922 136 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 Y_RNA.332-201ENST00000365271 113 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNU6-573P-201ENST00000383938 106 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNU6-1014P-201ENST00000383940 103 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNU6-440P-201ENST00000390882 105 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNA5SP424-201ENST00000390988 115 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 AF228730.3-201ENST00000436691 102 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RN7SL330P-201ENST00000469709 307 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RPL39P34-201ENST00000477141 156 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNU6-991P-201ENST00000516168 107 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNA5SP281-201ENST00000516504 135 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNU6-1096P-201ENST00000517089 102 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF135Q8IUD6 U2.20-201ENST00000613956 192 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 AL162274.2-201ENST00000614406 332 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF135Q8IUD6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF135Q8IUD6 AL035425.3-201ENST00000564206 4996 ntBASIC3.76□□□□□ -1.81
RNF135Q8IUD6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RNF135Q8IUD6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF135Q8IUD6 SNORD21-201ENST00000383953 95 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 Y_RNA.544-201ENST00000384650 113 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 MIR520G-201ENST00000385064 90 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 AL031121.1-201ENST00000406553 254 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 RPS3AP1-201ENST00000413190 320 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF135Q8IUD6 RN7SKP12-201ENST00000516275 143 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 AL365205.2-201ENST00000594586 68 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 AL442128.1-201ENST00000615151 90 ntBASIC3.75□□□□□ -1.81
RNF135Q8IUD6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF135Q8IUD6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF135Q8IUD6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF135Q8IUD6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF135Q8IUD6 SNORA68.1-201ENST00000364537 132 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 RNU6-1113P-201ENST00000384348 107 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 Y_RNA.486-201ENST00000384398 107 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 RNA5SP136-201ENST00000410906 107 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 AL513477.1-202ENST00000417061 214 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF135Q8IUD6 AC002075.2-201ENST00000425207 252 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF135Q8IUD6 SNORA48.11-201ENST00000517015 89 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 MIR5680-201ENST00000577577 84 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 AC104984.5-201ENST00000586878 94 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 AL035470.1-201ENST00000622571 220 ntBASIC3.74□□□□□ -1.81
RNF135Q8IUD6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
RNF135Q8IUD6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF135Q8IUD6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF135Q8IUD6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF135Q8IUD6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF135Q8IUD6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF135Q8IUD6 RNA5SP432-201ENST00000362480 116 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms