Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 AC010099.1-201ENST00000455434 375 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 HMGN1P18-201ENST00000457642 277 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 RNU6-126P-201ENST00000516685 103 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 RNA5SP380-201ENST00000517190 98 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 SUMO2P16-201ENST00000519475 264 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 SNORA62.6-201ENST00000606322 83 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 AC006435.5-201ENST00000624486 112 ntBASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXR1Q6PIV2 RNA5SP51-201ENST00000364750 119 ntBASIC3.63□□□□□ -1.83
FOXR1Q6PIV2 RPL39P39-201ENST00000455840 151 ntBASIC3.63□□□□□ -1.83
FOXR1Q6PIV2 AP002884.2-201ENST00000471647 395 ntBASIC3.63□□□□□ -1.83
FOXR1Q6PIV2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.63□□□□□ -1.83
FOXR1Q6PIV2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXR1Q6PIV2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 RNA5SP50-201ENST00000363731 107 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 RNA5SP189-201ENST00000364920 115 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 RNU6-1240P-201ENST00000365155 104 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 RNU6-234P-201ENST00000365229 104 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 RNU6-690P-201ENST00000365242 106 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 SNORD24-201ENST00000383884 75 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 MIR548D2-201ENST00000384955 97 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 MIR518F-201ENST00000384973 87 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 SNORA11.2-201ENST00000408318 127 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 Y_RNA.621-201ENST00000411065 96 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 Z92545.1-201ENST00000411782 234 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 Z98742.2-201ENST00000431564 187 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 RNU6-948P-201ENST00000516374 107 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 RNU6-1096P-201ENST00000517089 102 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 AP000867.2-201ENST00000532468 320 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 AC022254.1-201ENST00000567857 235 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 MIR5187-201ENST00000583479 76 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 MIR5195-201ENST00000583555 115 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 AC007229.1-201ENST00000590455 412 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 AC008739.2-201ENST00000597006 317 ntBASIC3.62□□□□□ -1.83
FOXR1Q6PIV2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 RNU6-349P-201ENST00000362402 107 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 SNORA31-201ENST00000362607 130 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 SNORD31B-201ENST00000364977 69 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 RNU6-198P-201ENST00000384258 104 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 MIR1294-201ENST00000408503 142 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 BX510359.1-201ENST00000456973 237 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 RNU2-13P-201ENST00000515909 113 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 RNU6-162P-201ENST00000516228 103 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 RNA5SP164-201ENST00000516533 110 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 AC026333.2-201ENST00000542164 106 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 MIR7975-201ENST00000619350 68 ntBASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
FOXR1Q6PIV2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 RNY3P2-201ENST00000362918 102 ntBASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 Y_RNA.298-201ENST00000364960 107 ntBASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 RNU6-1274P-201ENST00000384557 107 ntBASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 RPL32P34-201ENST00000486380 400 ntBASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 MIR5197-201ENST00000583721 112 ntBASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 AC021443.1-201ENST00000604478 211 ntBASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXR1Q6PIV2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 RNY1P1-201ENST00000364372 112 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 RPL39P25-201ENST00000449384 154 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 RNU7-23P-201ENST00000459465 62 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 AC006445.1-201ENST00000491925 405 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 RNU7-61P-201ENST00000515897 61 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 SCARNA23-201ENST00000516060 130 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 DEFB131E-201ENST00000532329 154 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 AC008507.4-201ENST00000585464 127 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 MIR3202-2-201ENST00000635980 79 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 AL162726.3-218ENST00000636401 95 ntBASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
FOXR1Q6PIV2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
FOXR1Q6PIV2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXR1Q6PIV2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
FOXR1Q6PIV2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.58□□□□□ -1.84
FOXR1Q6PIV2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.58□□□□□ -1.84
FOXR1Q6PIV2 RNU6-1276P-201ENST00000365372 104 ntBASIC3.58□□□□□ -1.84
FOXR1Q6PIV2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.58□□□□□ -1.84
FOXR1Q6PIV2 MIR490-201ENST00000384865 128 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms