Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-237P-201ENST00000515985 71 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 SCARNA3-201ENST00000517097 143 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 AC105245.1-201ENST00000581934 244 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 AP003357.1-201ENST00000604497 148 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 AC005972.2-201ENST00000604690 348 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 AC110774.1-201ENST00000623567 2018 ntBASIC3.48□□□□□ -1.85
PRPF40BQ6NWY9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 RNU1-72P-201ENST00000362976 153 ntBASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 SNORD50B-201ENST00000364995 70 ntBASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 RNU6-418P-201ENST00000384035 107 ntBASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 Y_RNA.521-201ENST00000384560 114 ntBASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 MIR181A2-201ENST00000384863 110 ntBASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 RNA5SP21-201ENST00000410917 96 ntBASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 AC018630.3-201ENST00000542637 96 ntBASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 AC127455.1-201ENST00000565496 145 ntBASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF40BQ6NWY9 SNORA68.1-201ENST00000364537 132 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-1323P-201ENST00000384025 107 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-1235P-201ENST00000384559 107 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 AL135786.1-201ENST00000415892 214 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 AC016925.1-201ENST00000458303 298 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-498P-201ENST00000459468 107 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 RPS27P22-201ENST00000478056 241 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 RNA5SP24-201ENST00000516478 95 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 RNA5SP490-201ENST00000517141 136 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 AC112693.2-201ENST00000556538 232 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 AL355596.1-201ENST00000565399 3996 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 MAPK10-362ENST00000641864 4484 ntBASIC3.46□□□□□ -1.86
PRPF40BQ6NWY9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-546P-201ENST00000383991 107 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 FO393413.1-201ENST00000402892 195 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 SNORA79-201ENST00000408376 140 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 AC244505.4-201ENST00000434905 287 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 RPS29P6-201ENST00000438196 145 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 AC008267.6-201ENST00000441664 139 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 SSXP5-201ENST00000443473 287 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-437P-201ENST00000459408 95 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 RPL36AP21-201ENST00000490372 323 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 RNA5SP385-201ENST00000515947 110 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 RNA5SP148-201ENST00000516527 94 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-63P-201ENST00000516690 95 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 MIR4506-201ENST00000584693 77 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 MIR5739-201ENST00000619803 80 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 MIR7843-201ENST00000622274 79 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 AC064859.1-201ENST00000624741 174 ntBASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF40BQ6NWY9 AC009487.4-201ENST00000624969 3585 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-743P-201ENST00000364151 106 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 SNORA20-201ENST00000384662 132 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 RNU2-32P-201ENST00000411193 191 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 UBL5P3-201ENST00000475112 231 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 AC025647.1-201ENST00000517879 253 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 AL365222.1-201ENST00000614661 98 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 AC006435.5-201ENST00000624486 112 ntBASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF40BQ6NWY9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-1290P-201ENST00000362957 109 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 RNU4-41P-201ENST00000364426 143 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 RNY3P5-201ENST00000384127 102 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 SNORA22C-201ENST00000384614 134 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 MIR181B1-201ENST00000385240 110 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-1168P-201ENST00000390831 104 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 AL512604.1-201ENST00000404812 257 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 AL161788.1-201ENST00000441805 169 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 AC090515.1-201ENST00000465295 476 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-561P-201ENST00000516222 102 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 RNU2-34P-201ENST00000516534 121 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 SNORD53-201ENST00000579969 78 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 AC093010.3-201ENST00000570269 15214 ntBASIC3.43□□□□□ -1.86
PRPF40BQ6NWY9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 Y_RNA.420-201ENST00000384043 110 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 MIR512-1-201ENST00000384913 84 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 RN7SKP123-201ENST00000410732 291 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 MTND4LP9-201ENST00000427694 174 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 RPS27P1-201ENST00000450552 247 ntBASIC3.42□□□□□ -1.86
PRPF40BQ6NWY9 HMGN2P18-201ENST00000450680 270 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms