Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 RNU6-945P-201ENST00000383947 107 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 EIF4E2P1-201ENST00000393781 255 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 MIR1912-201ENST00000410389 80 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AL606489.2-201ENST00000433886 234 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC083904.1-201ENST00000487828 231 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 AC022493.2-201ENST00000506122 481 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 RN7SKP287-201ENST00000516546 266 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 PRELID3BP2-201ENST00000605362 201 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 SNORA28-201ENST00000606769 126 ntBASIC0.25□□□□□ -2.37
ARFGEF3Q5TH69 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 SNORD114-7-201ENST00000362520 77 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 SNORD115-32-201ENST00000364079 82 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.361-201ENST00000365515 120 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-214P-201ENST00000384130 107 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 MIR1265-201ENST00000408444 86 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 RN7SKP142-201ENST00000411236 328 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 AC244098.3-201ENST00000424803 96 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 PIGPP3-201ENST00000425307 415 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 CALM2P4-201ENST00000430810 426 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 MTND3P16-201ENST00000452205 344 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 AC114811.1-201ENST00000507207 168 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 RNU4-54P-201ENST00000516428 129 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 SNORA25.14-201ENST00000516481 132 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 AC025627.3-201ENST00000582078 182 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 AL158063.1-201ENST00000615349 536 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 AC104260.1-201ENST00000616660 539 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 Z69908.1-201ENST00000622603 247 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 AC027279.3-201ENST00000625055 122 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 AC099654.12-201ENST00000639868 649 ntBASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-553P-201ENST00000364047 96 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-407P-201ENST00000365280 104 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-248P-201ENST00000410720 107 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-1332P-201ENST00000516666 104 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.695-201ENST00000516715 107 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-58P-201ENST00000517143 103 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AC073534.2-201ENST00000620377 381 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 uc_338.22-201ENST00000622722 187 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.77-201ENST00000362962 107 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.100-201ENST00000363141 102 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.267-201ENST00000364679 109 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 RNY1P8-201ENST00000383970 114 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 MIR140-201ENST00000385282 100 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AC104332.1-201ENST00000440471 797 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.682-201ENST00000516457 100 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 RNU7-172P-201ENST00000517125 64 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 MTND1P24-201ENST00000552175 861 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 AC244015.1-201ENST00000622301 99 ntBASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.23□□□□□ -2.37
ARFGEF3Q5TH69 RNY1P16-201ENST00000363063 111 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.490-201ENST00000384413 102 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.517-201ENST00000384551 106 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 MIR520C-201ENST00000385005 87 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 MIR452-201ENST00000385020 85 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 SNORD12-201ENST00000391002 90 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-1068P-201ENST00000410958 103 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AC008134.1-201ENST00000420943 193 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AC098869.1-201ENST00000481627 292 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RNU1-117P-201ENST00000517041 158 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AF235103.2-201ENST00000525753 346 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AP003716.2-201ENST00000528260 108 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 LRRC34P1-201ENST00000542742 915 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AC005828.6-201ENST00000606610 232 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AC109347.2-201ENST00000610220 349 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-369P-201ENST00000362515 102 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RNA5SP264-201ENST00000363115 107 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-996P-201ENST00000365438 107 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RNU6-128P-201ENST00000383976 107 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 Y_RNA.481-201ENST00000384373 102 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 SNORD111-201ENST00000408139 94 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 MIR1302-7-201ENST00000408841 72 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RPS3AP1-201ENST00000413190 320 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 FABP5P4-201ENST00000437203 171 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 SNORD5.1-201ENST00000458800 75 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 U7.7-201ENST00000459276 60 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 RNU7-12P-201ENST00000516030 62 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AL162413.1-201ENST00000603198 110 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AC104695.3-201ENST00000604052 296 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AP001330.5-201ENST00000607176 411 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AL355073.2-201ENST00000612106 557 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 AL357075.2-201ENST00000614906 189 ntBASIC0.22□□□□□ -2.37
ARFGEF3Q5TH69 MIR410-201ENST00000362222 80 ntBASIC0.21□□□□□ -2.38
ARFGEF3Q5TH69 SNORA25.3-201ENST00000363205 127 ntBASIC0.21□□□□□ -2.38
ARFGEF3Q5TH69 RNU6-254P-201ENST00000363377 107 ntBASIC0.21□□□□□ -2.38
ARFGEF3Q5TH69 SNORD115-30-201ENST00000364117 82 ntBASIC0.21□□□□□ -2.38
ARFGEF3Q5TH69 SNORD113.3-201ENST00000364630 78 ntBASIC0.21□□□□□ -2.38
ARFGEF3Q5TH69 RNU6-117P-201ENST00000365415 107 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms