Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 AL603914.1-201ENST00000401964 204 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 CYCSP49-201ENST00000420810 319 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 AC063976.3-201ENST00000426849 329 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 RPS12P18-201ENST00000442381 270 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 RPS29P12-201ENST00000460178 152 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 AC108081.1-201ENST00000604358 221 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 AL670379.3-201ENST00000605040 251 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 MIR4679-1-201ENST00000637619 75 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.12□□□□□ -1.91
ERVFC1P60507 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1P60507 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERVFC1P60507 Y_RNA.114-201ENST00000363265 113 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 RNU4-41P-201ENST00000364426 143 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 RNU6-975P-201ENST00000384296 105 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 RNU6-136P-201ENST00000384663 107 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 Y_RNA.617-201ENST00000410920 90 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 AC097463.2-201ENST00000421074 142 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 RNA5SP20-201ENST00000515976 84 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 MIR4753-201ENST00000585119 83 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 RPL30P11-203ENST00000598995 310 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 AC092435.3-201ENST00000565538 3654 ntBASIC3.11□□□□□ -1.91
ERVFC1P60507 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ERVFC1P60507 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ERVFC1P60507 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ERVFC1P60507 FAM35CP-201ENST00000554755 2470 ntBASIC3.1□□□□□ -1.91
ERVFC1P60507 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ERVFC1P60507 AL356292.1-201ENST00000283110 373 ntBASIC3.1□□□□□ -1.91
ERVFC1P60507 RNU6-1336P-201ENST00000383886 109 ntBASIC3.1□□□□□ -1.91
ERVFC1P60507 SNORD33.1-201ENST00000516213 88 ntBASIC3.1□□□□□ -1.91
ERVFC1P60507 AC133485.4-201ENST00000561835 220 ntBASIC3.1□□□□□ -1.91
ERVFC1P60507 AC138907.4-201ENST00000570107 226 ntBASIC3.1□□□□□ -1.91
ERVFC1P60507 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
ERVFC1P60507 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ERVFC1P60507 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ERVFC1P60507 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ERVFC1P60507 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ERVFC1P60507 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ERVFC1P60507 SNORD58C-201ENST00000365223 64 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 RNU6-117P-201ENST00000365415 107 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 RNU6-1080P-201ENST00000383982 107 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 SNORA72-201ENST00000384339 132 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 Y_RNA.630-201ENST00000411370 108 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 MLLT10P1-201ENST00000418346 262 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 SNORD109B-201ENST00000458961 67 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 SNORD109A-201ENST00000459128 67 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.09□□□□□ -1.91
ERVFC1P60507 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.09□□□□□ -1.91
ERVFC1P60507 SNORD77.4-201ENST00000516158 81 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 AC104984.5-201ENST00000586878 94 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 MIR6715A-201ENST00000615929 79 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
ERVFC1P60507 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
ERVFC1P60507 AC009487.2-201ENST00000420969 6821 ntBASIC3.09□□□□□ -1.92
ERVFC1P60507 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.92
ERVFC1P60507 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
ERVFC1P60507 GABRG2-229ENST00000641017 3628 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 RNU6-647P-201ENST00000364243 107 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 SNORD116-21-201ENST00000384507 92 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 MIRLET7F2-201ENST00000385277 83 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 RNA5SP89-201ENST00000410300 108 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 HMGN1P18-201ENST00000457642 277 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 RNU7-14P-201ENST00000459331 62 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 AC090515.1-201ENST00000465295 476 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 SNORA31.21-201ENST00000517180 77 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.08□□□□□ -1.92
ERVFC1P60507 AC015720.1-201ENST00000565251 277 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 MIR2681-201ENST00000581814 105 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 AC091178.2-201ENST00000584401 117 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
ERVFC1P60507 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.08□□□□□ -1.92
ERVFC1P60507 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.08□□□□□ -1.92
ERVFC1P60507 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ERVFC1P60507 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ERVFC1P60507 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.08□□□□□ -1.92
ERVFC1P60507 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
ERVFC1P60507 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.07□□□□□ -1.92
ERVFC1P60507 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ERVFC1P60507 MIR196B-201ENST00000384852 84 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 MIR1294-201ENST00000408503 142 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 RNA5SP511-201ENST00000410487 115 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 Y_RNA.651-201ENST00000459380 103 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 RPS26P45-201ENST00000471748 340 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 RNU6-168P-201ENST00000516189 101 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 Y_RNA.694-201ENST00000516677 117 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 RNU2-60P-201ENST00000517290 128 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
ERVFC1P60507 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms