Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 MIR539-201ENST00000365690 78 ntBASIC3.12□□□□□ -1.91
RTP1P59025 RNU6-768P-201ENST00000384683 107 ntBASIC3.12□□□□□ -1.91
RTP1P59025 SNORA67.4-201ENST00000384688 142 ntBASIC3.12□□□□□ -1.91
RTP1P59025 MIR767-201ENST00000390228 109 ntBASIC3.12□□□□□ -1.91
RTP1P59025 MIR300-201ENST00000401138 83 ntBASIC3.12□□□□□ -1.91
RTP1P59025 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.12□□□□□ -1.91
RTP1P59025 AC009414.1-201ENST00000427200 443 ntBASIC3.12□□□□□ -1.91
RTP1P59025 SNORD65B-201ENST00000459126 73 ntBASIC3.12□□□□□ -1.91
RTP1P59025 AC092991.1-201ENST00000477176 376 ntBASIC3.12□□□□□ -1.91
RTP1P59025 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
RTP1P59025 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
RTP1P59025 RNA5SP76-201ENST00000516277 87 ntBASIC3.12□□□□□ -1.91
RTP1P59025 MIR4765-201ENST00000585007 77 ntBASIC3.12□□□□□ -1.91
RTP1P59025 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
RTP1P59025 AC091564.4-201ENST00000533934 2194 ntBASIC3.12□□□□□ -1.91
RTP1P59025 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RTP1P59025 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.11□□□□□ -1.91
RTP1P59025 RNU1-105P-201ENST00000363470 161 ntBASIC3.11□□□□□ -1.91
RTP1P59025 MIR518C-201ENST00000384822 101 ntBASIC3.11□□□□□ -1.91
RTP1P59025 RNU6-460P-201ENST00000391158 108 ntBASIC3.11□□□□□ -1.91
RTP1P59025 MIR1278-201ENST00000408753 81 ntBASIC3.11□□□□□ -1.91
RTP1P59025 RPS29P6-201ENST00000438196 145 ntBASIC3.11□□□□□ -1.91
RTP1P59025 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.11□□□□□ -1.91
RTP1P59025 RPS27P26-201ENST00000494583 239 ntBASIC3.11□□□□□ -1.91
RTP1P59025 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.11□□□□□ -1.91
RTP1P59025 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.11□□□□□ -1.91
RTP1P59025 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
RTP1P59025 TUG1_4.1-201ENST00000619464 181 ntBASIC3.11□□□□□ -1.91
RTP1P59025 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.11□□□□□ -1.91
RTP1P59025 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
RTP1P59025 MIR6844-201ENST00000637122 62 ntBASIC3.11□□□□□ -1.91
RTP1P59025 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.11□□□□□ -1.91
RTP1P59025 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTP1P59025 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
RTP1P59025 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTP1P59025 RNY1P11-201ENST00000363759 113 ntBASIC3.1□□□□□ -1.91
RTP1P59025 RNU6-944P-201ENST00000364023 107 ntBASIC3.1□□□□□ -1.91
RTP1P59025 RNU6-1323P-201ENST00000384025 107 ntBASIC3.1□□□□□ -1.91
RTP1P59025 RNU6-80P-201ENST00000384195 107 ntBASIC3.1□□□□□ -1.91
RTP1P59025 RNU4-43P-201ENST00000410628 137 ntBASIC3.1□□□□□ -1.91
RTP1P59025 RNA5SP21-201ENST00000410917 96 ntBASIC3.1□□□□□ -1.91
RTP1P59025 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.1□□□□□ -1.91
RTP1P59025 snoU13.15-201ENST00000459407 104 ntBASIC3.1□□□□□ -1.91
RTP1P59025 RPS26P55-201ENST00000471178 356 ntBASIC3.1□□□□□ -1.91
RTP1P59025 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
RTP1P59025 ATP5EP1-201ENST00000510257 156 ntBASIC3.1□□□□□ -1.91
RTP1P59025 AC127455.1-201ENST00000565496 145 ntBASIC3.1□□□□□ -1.91
RTP1P59025 MIR3646-201ENST00000578301 84 ntBASIC3.1□□□□□ -1.91
RTP1P59025 MIR4753-201ENST00000585119 83 ntBASIC3.1□□□□□ -1.91
RTP1P59025 POLR3GP1-201ENST00000594073 261 ntBASIC3.1□□□□□ -1.91
RTP1P59025 snoZ196.1-201ENST00000625269 89 ntBASIC3.1□□□□□ -1.91
RTP1P59025 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
RTP1P59025 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTP1P59025 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTP1P59025 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTP1P59025 MIR26A1-201ENST00000362205 77 ntBASIC3.09□□□□□ -1.91
RTP1P59025 RNA5SP139-201ENST00000364340 117 ntBASIC3.09□□□□□ -1.91
RTP1P59025 Y_RNA.393-201ENST00000383936 102 ntBASIC3.09□□□□□ -1.91
RTP1P59025 RNY3P5-201ENST00000384127 102 ntBASIC3.09□□□□□ -1.91
RTP1P59025 RNU6-1274P-201ENST00000384557 107 ntBASIC3.09□□□□□ -1.91
RTP1P59025 MIR181B1-201ENST00000385240 110 ntBASIC3.09□□□□□ -1.91
RTP1P59025 SNORA3.2-201ENST00000408221 125 ntBASIC3.09□□□□□ -1.91
RTP1P59025 MIR1294-201ENST00000408503 142 ntBASIC3.09□□□□□ -1.91
RTP1P59025 RNU6-588P-201ENST00000410281 105 ntBASIC3.09□□□□□ -1.91
RTP1P59025 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.09□□□□□ -1.91
RTP1P59025 AC016717.1-201ENST00000448918 286 ntBASIC3.09□□□□□ -1.91
RTP1P59025 RPS27P1-201ENST00000450552 247 ntBASIC3.09□□□□□ -1.91
RTP1P59025 RNU6-221P-201ENST00000459541 99 ntBASIC3.09□□□□□ -1.91
RTP1P59025 AC010598.1-201ENST00000510378 103 ntBASIC3.09□□□□□ -1.91
RTP1P59025 RNA5SP112-201ENST00000515937 99 ntBASIC3.09□□□□□ -1.91
RTP1P59025 Y_RNA.686-201ENST00000516548 134 ntBASIC3.09□□□□□ -1.91
RTP1P59025 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RTP1P59025 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
RTP1P59025 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RTP1P59025 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.08□□□□□ -1.92
RTP1P59025 AL356292.1-201ENST00000283110 373 ntBASIC3.08□□□□□ -1.92
RTP1P59025 RNU6-271P-201ENST00000363858 105 ntBASIC3.08□□□□□ -1.92
RTP1P59025 RNU6-234P-201ENST00000365229 104 ntBASIC3.08□□□□□ -1.92
RTP1P59025 U8.9-201ENST00000365667 134 ntBASIC3.08□□□□□ -1.92
RTP1P59025 RNU6-44P-201ENST00000384045 107 ntBASIC3.08□□□□□ -1.92
RTP1P59025 RNU6-975P-201ENST00000384296 105 ntBASIC3.08□□□□□ -1.92
RTP1P59025 Y_RNA.521-201ENST00000384560 114 ntBASIC3.08□□□□□ -1.92
RTP1P59025 RNA5SP354-201ENST00000391247 136 ntBASIC3.08□□□□□ -1.92
RTP1P59025 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.08□□□□□ -1.92
RTP1P59025 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.08□□□□□ -1.92
RTP1P59025 RPL36AP21-201ENST00000490372 323 ntBASIC3.08□□□□□ -1.92
RTP1P59025 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.08□□□□□ -1.92
RTP1P59025 SCARNA17.1-201ENST00000516211 143 ntBASIC3.08□□□□□ -1.92
RTP1P59025 SCARNA17.2-201ENST00000516334 143 ntBASIC3.08□□□□□ -1.92
RTP1P59025 AC109329.2-201ENST00000519658 482 ntBASIC3.08□□□□□ -1.92
RTP1P59025 AC005972.2-201ENST00000604690 348 ntBASIC3.08□□□□□ -1.92
RTP1P59025 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.08□□□□□ -1.92
RTP1P59025 AC011603.4-201ENST00000611325 277 ntBASIC3.08□□□□□ -1.92
RTP1P59025 SCARNA17.4-201ENST00000614296 143 ntBASIC3.08□□□□□ -1.92
RTP1P59025 ZNF658B-202ENST00000615961 3375 ntBASIC3.08□□□□□ -1.92
RTP1P59025 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
RTP1P59025 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RTP1P59025 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.07□□□□□ -1.92
RTP1P59025 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
RTP1P59025 SNORD45.3-201ENST00000363836 72 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms