Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC007283.2-201ENST00000424739 197 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AC010153.1-201ENST00000432862 727 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.93□□□□□ -2.56
APOBP04114 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.93□□□□□ -2.56
APOBP04114 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.93□□□□□ -2.56
APOBP04114 SNORD18.2-201ENST00000459604 70 ntBASIC-0.93□□□□□ -2.56
APOBP04114 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.93□□□□□ -2.56
APOBP04114 RNU2-56P-201ENST00000516826 190 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MIR4280-201ENST00000582178 76 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MIR19A-201ENST00000384878 82 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MIR10A-201ENST00000385043 110 ntBASIC-0.93□□□□□ -2.56
APOBP04114 SNORD22.1-201ENST00000516331 125 ntBASIC-0.93□□□□□ -2.56
APOBP04114 RPL21P9-201ENST00000556149 474 ntBASIC-0.93□□□□□ -2.56
APOBP04114 MIR5692A1-201ENST00000580523 69 ntBASIC-0.93□□□□□ -2.56
APOBP04114 AC064872.1-201ENST00000604823 1072 ntBASIC-0.93□□□□□ -2.56
APOBP04114 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AC117470.1-201ENST00000381974 330 ntBASIC-0.94□□□□□ -2.56
APOBP04114 MIR9-2-201ENST00000384838 87 ntBASIC-0.94□□□□□ -2.56
APOBP04114 MIR487A-201ENST00000385009 80 ntBASIC-0.94□□□□□ -2.56
APOBP04114 TIMM9P3-201ENST00000428659 274 ntBASIC-0.94□□□□□ -2.56
APOBP04114 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AL031274.1-201ENST00000450334 232 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.94□□□□□ -2.56
APOBP04114 AL020997.3-201ENST00000602843 359 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AC022306.2-201ENST00000617563 647 ntBASIC-0.94□□□□□ -2.56
APOBP04114 uc_338.10-201ENST00000621872 182 ntBASIC-0.94□□□□□ -2.56
APOBP04114 RNU7-102P-201ENST00000458948 62 ntBASIC-0.94□□□□□ -2.56
APOBP04114 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.94□□□□□ -2.56
APOBP04114 AC120024.3-201ENST00000603167 156 ntBASIC-0.94□□□□□ -2.56
APOBP04114 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AL158050.1-201ENST00000416077 457 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.94□□□□□ -2.56
APOBP04114 AC009902.1-201ENST00000519351 183 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.94□□□□□ -2.56
APOBP04114 SNORD92-201ENST00000585078 85 ntBASIC-0.94□□□□□ -2.56
APOBP04114 RNU6-228P-201ENST00000362700 106 ntBASIC-0.94□□□□□ -2.56
APOBP04114 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AL590084.2-201ENST00000401481 382 ntBASIC-0.94□□□□□ -2.56
APOBP04114 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AL158053.1-201ENST00000441503 453 ntBASIC-0.94□□□□□ -2.56
APOBP04114 RPL30P15-201ENST00000457129 321 ntBASIC-0.94□□□□□ -2.56
APOBP04114 snoU13.13-201ENST00000458842 104 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AC025647.1-201ENST00000517879 253 ntBASIC-0.94□□□□□ -2.56
APOBP04114 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.94□□□□□ -2.56
APOBP04114 snoZ196.1-201ENST00000625269 89 ntBASIC-0.94□□□□□ -2.56
APOBP04114 SNORD18.1-201ENST00000363807 70 ntBASIC-0.95□□□□□ -2.56
APOBP04114 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.95□□□□□ -2.56
APOBP04114 RNU6-431P-201ENST00000383874 107 ntBASIC-0.95□□□□□ -2.56
APOBP04114 RNA5SP475-201ENST00000410568 110 ntBASIC-0.95□□□□□ -2.56
APOBP04114 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.95□□□□□ -2.56
APOBP04114 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.95□□□□□ -2.56
APOBP04114 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.95□□□□□ -2.56
APOBP04114 MTCO2P5-201ENST00000422621 426 ntBASIC-0.95□□□□□ -2.56
APOBP04114 RNA5SP272-201ENST00000516095 111 ntBASIC-0.95□□□□□ -2.56
APOBP04114 SNORD38.3-201ENST00000516599 73 ntBASIC-0.95□□□□□ -2.56
APOBP04114 RNU7-128P-201ENST00000517247 62 ntBASIC-0.95□□□□□ -2.56
APOBP04114 MIR6818-201ENST00000621576 65 ntBASIC-0.95□□□□□ -2.56
APOBP04114 AC006927.4-201ENST00000639187 543 ntBASIC-0.95□□□□□ -2.56
APOBP04114 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.95□□□□□ -2.56
APOBP04114 RNA5SP93-201ENST00000362525 114 ntBASIC-0.95□□□□□ -2.56
APOBP04114 MIR136-201ENST00000385207 82 ntBASIC-0.95□□□□□ -2.56
APOBP04114 AL929288.2-201ENST00000446368 407 ntBASIC-0.95□□□□□ -2.56
APOBP04114 MTND3P4-201ENST00000453537 303 ntBASIC-0.95□□□□□ -2.56
APOBP04114 AC093809.1-201ENST00000509155 340 ntBASIC-0.95□□□□□ -2.56
APOBP04114 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.95□□□□□ -2.56
APOBP04114 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNU6-386P-201ENST00000362650 107 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNU6-701P-201ENST00000384059 107 ntBASIC-0.96□□□□□ -2.56
APOBP04114 MIR527-201ENST00000385244 85 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNU6-588P-201ENST00000410281 105 ntBASIC-0.96□□□□□ -2.56
APOBP04114 VN1R10P-201ENST00000447106 875 ntBASIC-0.96□□□□□ -2.56
APOBP04114 AL118556.2-201ENST00000614375 824 ntBASIC-0.96□□□□□ -2.56
APOBP04114 AL354950.2-201ENST00000617939 290 ntBASIC-0.96□□□□□ -2.56
APOBP04114 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.96□□□□□ -2.56
APOBP04114 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.96□□□□□ -2.56
APOBP04114 CALM2P4-201ENST00000430810 426 ntBASIC-0.96□□□□□ -2.56
APOBP04114 AC244505.6-201ENST00000452829 130 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNU6-953P-201ENST00000459154 107 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNU6-167P-201ENST00000384292 106 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNU6-378P-201ENST00000384324 107 ntBASIC-0.96□□□□□ -2.56
APOBP04114 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.96□□□□□ -2.56
APOBP04114 AC092447.3-201ENST00000426027 686 ntBASIC-0.96□□□□□ -2.56
APOBP04114 AC007547.1-201ENST00000462177 490 ntBASIC-0.96□□□□□ -2.56
APOBP04114 RNA5SP47-201ENST00000517230 109 ntBASIC-0.96□□□□□ -2.56
APOBP04114 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.96□□□□□ -2.56
APOBP04114 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.96□□□□□ -2.56
APOBP04114 SUMO1P3-201ENST00000439961 304 ntBASIC-0.96□□□□□ -2.56
APOBP04114 AL445193.1-201ENST00000441183 141 ntBASIC-0.96□□□□□ -2.56
APOBP04114 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.96□□□□□ -2.56
APOBP04114 AC005592.1-201ENST00000566527 1640 ntBASIC-0.97□□□□□ -2.56
APOBP04114 SNORD116-20-201ENST00000384529 92 ntBASIC-0.97□□□□□ -2.56
APOBP04114 RNU6-83P-201ENST00000384568 112 ntBASIC-0.97□□□□□ -2.56
APOBP04114 MIR29B1-201ENST00000385015 81 ntBASIC-0.97□□□□□ -2.56
APOBP04114 AC090960.1-201ENST00000421072 306 ntBASIC-0.97□□□□□ -2.56
APOBP04114 AC090502.2-201ENST00000549267 280 ntBASIC-0.97□□□□□ -2.56
APOBP04114 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.97□□□□□ -2.56
APOBP04114 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms