Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.45□□□□□ -2.18
SIX3O95343 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.45□□□□□ -2.18
SIX3O95343 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.45□□□□□ -2.18
SIX3O95343 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.45□□□□□ -2.18
SIX3O95343 AC018448.1-201ENST00000552843 316 ntBASIC1.45□□□□□ -2.18
SIX3O95343 AL442163.3-201ENST00000554110 156 ntBASIC1.45□□□□□ -2.18
SIX3O95343 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.45□□□□□ -2.18
SIX3O95343 AC022217.4-201ENST00000604389 163 ntBASIC1.45□□□□□ -2.18
SIX3O95343 AC133104.2-201ENST00000615272 193 ntBASIC1.45□□□□□ -2.18
SIX3O95343 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.45□□□□□ -2.18
SIX3O95343 U6.108-201ENST00000637764 58 ntBASIC1.45□□□□□ -2.18
SIX3O95343 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SIX3O95343 RNU6-874P-201ENST00000362390 105 ntBASIC1.44□□□□□ -2.18
SIX3O95343 SNORA70.7-201ENST00000384159 133 ntBASIC1.44□□□□□ -2.18
SIX3O95343 RNU6-1145P-201ENST00000384246 107 ntBASIC1.44□□□□□ -2.18
SIX3O95343 SNORA69.1-201ENST00000390904 137 ntBASIC1.44□□□□□ -2.18
SIX3O95343 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.44□□□□□ -2.18
SIX3O95343 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.44□□□□□ -2.18
SIX3O95343 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.44□□□□□ -2.18
SIX3O95343 AC098614.3-201ENST00000438957 440 ntBASIC1.44□□□□□ -2.18
SIX3O95343 AC027119.1-201ENST00000440877 241 ntBASIC1.44□□□□□ -2.18
SIX3O95343 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.44□□□□□ -2.18
SIX3O95343 RPL30P15-201ENST00000457129 321 ntBASIC1.44□□□□□ -2.18
SIX3O95343 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.44□□□□□ -2.18
SIX3O95343 PRDX4P1-201ENST00000507189 574 ntBASIC1.44□□□□□ -2.18
SIX3O95343 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.44□□□□□ -2.18
SIX3O95343 RN7SKP49-201ENST00000516675 260 ntBASIC1.44□□□□□ -2.18
SIX3O95343 RNU2-56P-201ENST00000516826 190 ntBASIC1.44□□□□□ -2.18
SIX3O95343 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.44□□□□□ -2.18
SIX3O95343 AC015688.6-201ENST00000577737 104 ntBASIC1.44□□□□□ -2.18
SIX3O95343 AL365434.2-201ENST00000607979 234 ntBASIC1.44□□□□□ -2.18
SIX3O95343 AC021506.2-201ENST00000612354 169 ntBASIC1.44□□□□□ -2.18
SIX3O95343 AL078604.3-201ENST00000615580 211 ntBASIC1.44□□□□□ -2.18
SIX3O95343 AC018630.2-201ENST00000534866 2403 ntBASIC1.44□□□□□ -2.18
SIX3O95343 Y_RNA.265-201ENST00000364677 108 ntBASIC1.43□□□□□ -2.18
SIX3O95343 SNORD81.2-201ENST00000365153 76 ntBASIC1.43□□□□□ -2.18
SIX3O95343 SNORA20B-201ENST00000384220 132 ntBASIC1.43□□□□□ -2.18
SIX3O95343 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
SIX3O95343 SNORD12B-201ENST00000410433 91 ntBASIC1.43□□□□□ -2.18
SIX3O95343 RNU6-1304P-201ENST00000411374 106 ntBASIC1.43□□□□□ -2.18
SIX3O95343 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
SIX3O95343 STAG3L5P-204ENST00000443759 179 ntBASIC1.43□□□□□ -2.18
SIX3O95343 U8.22-201ENST00000459141 133 ntBASIC1.43□□□□□ -2.18
SIX3O95343 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.43□□□□□ -2.18
SIX3O95343 AC022493.2-201ENST00000506122 481 ntBASIC1.43□□□□□ -2.18
SIX3O95343 Y_RNA.675-201ENST00000516389 149 ntBASIC1.43□□□□□ -2.18
SIX3O95343 MIR2355-201ENST00000517199 87 ntBASIC1.43□□□□□ -2.18
SIX3O95343 MIR151B-201ENST00000584249 96 ntBASIC1.43□□□□□ -2.18
SIX3O95343 AL162424.1-201ENST00000602325 221 ntBASIC1.43□□□□□ -2.18
SIX3O95343 SNORA28-201ENST00000606769 126 ntBASIC1.43□□□□□ -2.18
SIX3O95343 AC008133.2-201ENST00000624540 351 ntBASIC1.43□□□□□ -2.18
SIX3O95343 MIR3674-201ENST00000636576 68 ntBASIC1.43□□□□□ -2.18
SIX3O95343 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SIX3O95343 RNA5SP457-201ENST00000363657 124 ntBASIC1.42□□□□□ -2.18
SIX3O95343 RNU4-13P-201ENST00000364019 141 ntBASIC1.42□□□□□ -2.18
SIX3O95343 Y_RNA.267-201ENST00000364679 109 ntBASIC1.42□□□□□ -2.18
SIX3O95343 MIR517C-201ENST00000385103 95 ntBASIC1.42□□□□□ -2.18
SIX3O95343 Y_RNA.605-201ENST00000410577 105 ntBASIC1.42□□□□□ -2.18
SIX3O95343 MTCO3P19-201ENST00000415864 321 ntBASIC1.42□□□□□ -2.18
SIX3O95343 PDCL2P1-201ENST00000419302 352 ntBASIC1.42□□□□□ -2.18
SIX3O95343 PGBD4P5-201ENST00000445958 426 ntBASIC1.42□□□□□ -2.18
SIX3O95343 RPS27P1-201ENST00000450552 247 ntBASIC1.42□□□□□ -2.18
SIX3O95343 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.42□□□□□ -2.18
SIX3O95343 AC097462.1-201ENST00000514125 324 ntBASIC1.42□□□□□ -2.18
SIX3O95343 SNORA40.9-201ENST00000515895 93 ntBASIC1.42□□□□□ -2.18
SIX3O95343 RNA5SP20-201ENST00000515976 84 ntBASIC1.42□□□□□ -2.18
SIX3O95343 RNU6-559P-201ENST00000516151 98 ntBASIC1.42□□□□□ -2.18
SIX3O95343 SNORA31.10-201ENST00000516482 106 ntBASIC1.42□□□□□ -2.18
SIX3O95343 Y_RNA.691-201ENST00000516611 103 ntBASIC1.42□□□□□ -2.18
SIX3O95343 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.42□□□□□ -2.18
SIX3O95343 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
SIX3O95343 AC015720.1-201ENST00000565251 277 ntBASIC1.42□□□□□ -2.18
SIX3O95343 RN7SL793P-201ENST00000583259 296 ntBASIC1.42□□□□□ -2.18
SIX3O95343 AL357075.2-201ENST00000614906 189 ntBASIC1.42□□□□□ -2.18
SIX3O95343 SNORD3E-202ENST00000627253 216 ntBASIC1.42□□□□□ -2.18
SIX3O95343 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.42□□□□□ -2.18
SIX3O95343 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SIX3O95343 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
SIX3O95343 RNU6-1310P-201ENST00000384153 107 ntBASIC1.41□□□□□ -2.18
SIX3O95343 MIR194-1-201ENST00000384892 85 ntBASIC1.41□□□□□ -2.18
SIX3O95343 MIR562-201ENST00000384894 95 ntBASIC1.41□□□□□ -2.18
SIX3O95343 RNU6-1156P-201ENST00000410365 100 ntBASIC1.41□□□□□ -2.18
SIX3O95343 RNU4-14P-201ENST00000410858 122 ntBASIC1.41□□□□□ -2.18
SIX3O95343 ELOCP21-201ENST00000412558 336 ntBASIC1.41□□□□□ -2.18
SIX3O95343 AC018865.2-201ENST00000423631 129 ntBASIC1.41□□□□□ -2.18
SIX3O95343 RPS27P16-201ENST00000425758 201 ntBASIC1.41□□□□□ -2.18
SIX3O95343 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.41□□□□□ -2.18
SIX3O95343 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
SIX3O95343 Y_RNA.653-201ENST00000459091 95 ntBASIC1.41□□□□□ -2.18
SIX3O95343 RNU6-1278P-201ENST00000516130 107 ntBASIC1.41□□□□□ -2.18
SIX3O95343 RNU7-4P-201ENST00000516961 62 ntBASIC1.41□□□□□ -2.18
SIX3O95343 AC144568.1-201ENST00000520139 137 ntBASIC1.41□□□□□ -2.18
SIX3O95343 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.41□□□□□ -2.18
SIX3O95343 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.41□□□□□ -2.18
SIX3O95343 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
SIX3O95343 AL645939.4-201ENST00000604495 135 ntBASIC1.41□□□□□ -2.18
SIX3O95343 PRR13P7-201ENST00000605538 430 ntBASIC1.41□□□□□ -2.18
SIX3O95343 AC022306.2-201ENST00000617563 647 ntBASIC1.41□□□□□ -2.18
SIX3O95343 MIR6079-201ENST00000635807 62 ntBASIC1.41□□□□□ -2.18
SIX3O95343 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms