Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPM3O75607 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPM3O75607 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPM3O75607 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPM3O75607 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPM3O75607 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPM3O75607 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NPM3O75607 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.35□□□□□ -1.55
NPM3O75607 RNU6-161P-201ENST00000363051 106 ntBASIC5.35□□□□□ -1.55
NPM3O75607 RNA5SP366-201ENST00000365454 123 ntBASIC5.35□□□□□ -1.55
NPM3O75607 RNU6-220P-201ENST00000390919 107 ntBASIC5.35□□□□□ -1.55
NPM3O75607 AC011998.1-201ENST00000433403 117 ntBASIC5.35□□□□□ -1.55
NPM3O75607 AC023424.1-201ENST00000496058 459 ntBASIC5.35□□□□□ -1.55
NPM3O75607 AC015912.2-201ENST00000571053 181 ntBASIC5.35□□□□□ -1.55
NPM3O75607 AC068724.3-201ENST00000625906 87 ntBASIC5.35□□□□□ -1.55
NPM3O75607 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPM3O75607 AL022322.2-201ENST00000624072 20397 ntBASIC5.35□□□□□ -1.55
NPM3O75607 ANKRD18EP-201ENST00000405487 2632 ntBASIC5.35□□□□□ -1.55
NPM3O75607 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.34□□□□□ -1.55
NPM3O75607 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPM3O75607 SNORA11F-201ENST00000408237 128 ntBASIC5.34□□□□□ -1.55
NPM3O75607 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.34□□□□□ -1.55
NPM3O75607 AC079587.1-201ENST00000603846 277 ntBASIC5.34□□□□□ -1.55
NPM3O75607 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC5.34□□□□□ -1.55
NPM3O75607 MIR3653-201ENST00000625572 110 ntBASIC5.34□□□□□ -1.55
NPM3O75607 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPM3O75607 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NPM3O75607 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPM3O75607 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.34□□□□□ -1.55
NPM3O75607 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPM3O75607 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPM3O75607 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPM3O75607 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
NPM3O75607 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
NPM3O75607 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.34□□□□□ -1.56
NPM3O75607 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NPM3O75607 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
NPM3O75607 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.33□□□□□ -1.56
NPM3O75607 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NPM3O75607 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.33□□□□□ -1.56
NPM3O75607 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPM3O75607 RNU1-101P-201ENST00000391171 127 ntBASIC5.33□□□□□ -1.56
NPM3O75607 MIR3616-201ENST00000584070 92 ntBASIC5.33□□□□□ -1.56
NPM3O75607 RPL12P50-201ENST00000603116 116 ntBASIC5.33□□□□□ -1.56
NPM3O75607 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPM3O75607 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPM3O75607 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPM3O75607 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPM3O75607 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPM3O75607 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPM3O75607 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPM3O75607 Y_RNA.205-201ENST00000364128 113 ntBASIC5.32□□□□□ -1.56
NPM3O75607 SNORA70C-201ENST00000384538 135 ntBASIC5.32□□□□□ -1.56
NPM3O75607 RNU6-1031P-201ENST00000384773 107 ntBASIC5.32□□□□□ -1.56
NPM3O75607 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.32□□□□□ -1.56
NPM3O75607 CYP3A52P-201ENST00000563326 91 ntBASIC5.32□□□□□ -1.56
NPM3O75607 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.32□□□□□ -1.56
NPM3O75607 AC026271.5-201ENST00000577873 130 ntBASIC5.32□□□□□ -1.56
NPM3O75607 AC113403.1-201ENST00000604910 193 ntBASIC5.32□□□□□ -1.56
NPM3O75607 AC022513.1-201ENST00000624512 117 ntBASIC5.32□□□□□ -1.56
NPM3O75607 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NPM3O75607 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NPM3O75607 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPM3O75607 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPM3O75607 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPM3O75607 AC112198.2-201ENST00000426589 6996 ntBASIC5.31□□□□□ -1.56
NPM3O75607 RNU1-109P-201ENST00000383960 147 ntBASIC5.31□□□□□ -1.56
NPM3O75607 CYCSP29-201ENST00000533731 318 ntBASIC5.31□□□□□ -1.56
NPM3O75607 AC007224.1-201ENST00000564410 144 ntBASIC5.31□□□□□ -1.56
NPM3O75607 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC5.31□□□□□ -1.56
NPM3O75607 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.31□□□□□ -1.56
NPM3O75607 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPM3O75607 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPM3O75607 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPM3O75607 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NPM3O75607 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPM3O75607 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPM3O75607 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NPM3O75607 RNU6-987P-201ENST00000384759 104 ntBASIC5.3□□□□□ -1.56
NPM3O75607 SNORA11-201ENST00000408789 128 ntBASIC5.3□□□□□ -1.56
NPM3O75607 RPS12P10-201ENST00000427031 377 ntBASIC5.3□□□□□ -1.56
NPM3O75607 RPL23AP6-201ENST00000446637 472 ntBASIC5.3□□□□□ -1.56
NPM3O75607 RN7SKP132-201ENST00000516001 208 ntBASIC5.3□□□□□ -1.56
NPM3O75607 RNU6-1108P-201ENST00000516308 104 ntBASIC5.3□□□□□ -1.56
NPM3O75607 MIR492-201ENST00000638676 116 ntBASIC5.3□□□□□ -1.56
NPM3O75607 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.3□□□□□ -1.56
NPM3O75607 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC5.3□□□□□ -1.56
NPM3O75607 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NPM3O75607 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.3□□□□□ -1.56
NPM3O75607 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NPM3O75607 RNU1-83P-201ENST00000363426 164 ntBASIC5.29□□□□□ -1.56
NPM3O75607 RNU1-132P-201ENST00000364300 164 ntBASIC5.29□□□□□ -1.56
NPM3O75607 MIR921-201ENST00000401133 56 ntBASIC5.29□□□□□ -1.56
NPM3O75607 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.29□□□□□ -1.56
NPM3O75607 BX510359.1-201ENST00000456973 237 ntBASIC5.29□□□□□ -1.56
NPM3O75607 Y_RNA.648-201ENST00000459455 110 ntBASIC5.29□□□□□ -1.56
NPM3O75607 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.29□□□□□ -1.56
NPM3O75607 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NPM3O75607 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPM3O75607 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms