Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 AL121839.2-201ENST00000565058 6943 ntBASIC5.1□□□□□ -1.59
RNF39Q9H2S5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 AL732292.1-201ENST00000426692 226 ntBASIC5.1□□□□□ -1.59
RNF39Q9H2S5 RNU6-1194P-201ENST00000516208 104 ntBASIC5.1□□□□□ -1.59
RNF39Q9H2S5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 AC015813.6-201ENST00000624409 5808 ntBASIC5.1□□□□□ -1.59
RNF39Q9H2S5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.09□□□□□ -1.59
RNF39Q9H2S5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 SNORD101-201ENST00000384027 73 ntBASIC5.09□□□□□ -1.59
RNF39Q9H2S5 SNORD63B-201ENST00000411005 70 ntBASIC5.09□□□□□ -1.59
RNF39Q9H2S5 SCARNA15.3-201ENST00000626315 122 ntBASIC5.09□□□□□ -1.59
RNF39Q9H2S5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF39Q9H2S5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
RNF39Q9H2S5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
RNF39Q9H2S5 AL022311.1-201ENST00000623726 19416 ntBASIC5.09□□□□□ -1.6
RNF39Q9H2S5 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 SNORD38B-201ENST00000384690 67 ntBASIC5.08□□□□□ -1.6
RNF39Q9H2S5 MIR129-1-201ENST00000384972 72 ntBASIC5.08□□□□□ -1.6
RNF39Q9H2S5 RNU6-1052P-201ENST00000411398 104 ntBASIC5.08□□□□□ -1.6
RNF39Q9H2S5 RN7SL385P-201ENST00000468873 276 ntBASIC5.08□□□□□ -1.6
RNF39Q9H2S5 RNU6-719P-201ENST00000516671 104 ntBASIC5.08□□□□□ -1.6
RNF39Q9H2S5 MIR4696-201ENST00000581431 70 ntBASIC5.08□□□□□ -1.6
RNF39Q9H2S5 SNORD38B-202ENST00000625943 69 ntBASIC5.08□□□□□ -1.6
RNF39Q9H2S5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF39Q9H2S5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 RNA5SP215-201ENST00000363440 122 ntBASIC5.07□□□□□ -1.6
RNF39Q9H2S5 RNU6-382P-201ENST00000365181 106 ntBASIC5.07□□□□□ -1.6
RNF39Q9H2S5 MIR659-201ENST00000384963 97 ntBASIC5.07□□□□□ -1.6
RNF39Q9H2S5 MIR6076-201ENST00000617521 113 ntBASIC5.07□□□□□ -1.6
RNF39Q9H2S5 TRDV1-202ENST00000621643 102 ntBASIC5.07□□□□□ -1.6
RNF39Q9H2S5 IST1-227ENST00000626438 126 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF39Q9H2S5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 RNA5SP447-201ENST00000363749 119 ntBASIC5.06□□□□□ -1.6
RNF39Q9H2S5 SNORA62-201ENST00000365493 153 ntBASIC5.06□□□□□ -1.6
RNF39Q9H2S5 RNU6-1177P-201ENST00000391058 104 ntBASIC5.06□□□□□ -1.6
RNF39Q9H2S5 SNORA11-201ENST00000408789 128 ntBASIC5.06□□□□□ -1.6
RNF39Q9H2S5 RNU11-2P-201ENST00000516898 142 ntBASIC5.06□□□□□ -1.6
RNF39Q9H2S5 MIR4277-201ENST00000578298 84 ntBASIC5.06□□□□□ -1.6
RNF39Q9H2S5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF39Q9H2S5 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 AF117829.1-206ENST00000621883 3802 ntBASIC5.05□□□□□ -1.6
RNF39Q9H2S5 AC010733.2-201ENST00000589496 5702 ntBASIC5.05□□□□□ -1.6
RNF39Q9H2S5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 RNA5SP97-201ENST00000365006 84 ntBASIC5.05□□□□□ -1.6
RNF39Q9H2S5 RNU6-302P-201ENST00000365249 107 ntBASIC5.05□□□□□ -1.6
RNF39Q9H2S5 SUMO2P12-201ENST00000405924 140 ntBASIC5.05□□□□□ -1.6
RNF39Q9H2S5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF39Q9H2S5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms