Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
PAAF1Q9BRP4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 Y_RNA.286-201ENST00000364813 102 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 RNU6-407P-201ENST00000365280 104 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 Y_RNA.581-201ENST00000391017 97 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 U3.40-201ENST00000408706 208 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 SUMO1P2-201ENST00000452524 304 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 TRBVB-201ENST00000477100 408 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 RNU6-496P-201ENST00000516145 99 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 AL161670.1-201ENST00000554348 137 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 AC015712.3-201ENST00000559380 164 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 7SK.10-201ENST00000621414 298 ntBASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PAAF1Q9BRP4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 snoU2_19.2-201ENST00000363024 80 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.144-201ENST00000363521 113 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 RNU6-290P-201ENST00000365212 101 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.376-201ENST00000365638 108 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.383-201ENST00000383855 97 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 SNORA20B-201ENST00000384220 132 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 RNU6-102P-201ENST00000384485 104 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 RNU6-417P-201ENST00000384712 107 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 MIR518A2-201ENST00000384966 87 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 SNORA53-201ENST00000391141 249 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 HMGN2P39-201ENST00000398005 273 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 AL031003.1-201ENST00000404229 172 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 AC024067.1-201ENST00000426199 223 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 RPS27P22-201ENST00000478056 241 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 HMGB3P3-201ENST00000510526 400 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 SNORA70.12-201ENST00000516084 153 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 SNRPGP19-201ENST00000603826 189 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 FO624990.1-201ENST00000636373 85 ntBASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.21□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.84-201ENST00000363011 104 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 RNU6-271P-201ENST00000363858 105 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 SNORD115-30-201ENST00000364117 82 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.329-201ENST00000365209 107 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 RNU6-463P-201ENST00000384340 107 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.569-201ENST00000384749 103 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 MIR568-201ENST00000385036 95 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 U8.13-201ENST00000390842 128 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AC016909.1-201ENST00000415916 166 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AL353689.1-201ENST00000438895 199 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 HSPE1P25-201ENST00000455484 251 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 RNU7-193P-201ENST00000516723 65 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AL137100.2-201ENST00000555786 315 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 MIR3169-201ENST00000578032 83 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PAAF1Q9BRP4 AC080100.1-201ENST00000624239 5356 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 AC010615.1-201ENST00000594254 1764 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 RNU6-514P-201ENST00000384208 107 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.556-201ENST00000384677 113 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 MIR597-201ENST00000384968 97 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 RNA5SP465-201ENST00000391195 109 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 AL355796.1-201ENST00000406706 323 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 RNU6-1199P-201ENST00000411249 104 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 RNU6-237P-201ENST00000515985 71 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 RNU6-966P-201ENST00000516479 104 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 AC023157.2-201ENST00000540596 141 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 MIR4529-201ENST00000578110 78 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 U4.1-201ENST00000620349 87 ntBASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PAAF1Q9BRP4 ZNF271P-202ENST00000465539 1970 ntBASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 SNORD81.1-201ENST00000363064 77 ntBASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.396-201ENST00000383949 103 ntBASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 RNU6-574P-201ENST00000384265 107 ntBASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 Y_RNA.541-201ENST00000384640 113 ntBASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 RNA5SP323-201ENST00000391094 133 ntBASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 RNU6-1203P-201ENST00000410703 110 ntBASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
PAAF1Q9BRP4 AC010409.1-201ENST00000487382 476 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms