Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC062037.1-201ENST00000605302 128 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SHKBP1Q8TBC3 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP189-201ENST00000364920 115 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 RNU6-117P-201ENST00000365415 107 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 MIR488-201ENST00000365739 83 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 SNORD14D-201ENST00000384390 87 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 SNORA44-201ENST00000384584 132 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 MIR570-201ENST00000384917 97 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 SNORA26-201ENST00000391286 122 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 MIR1283-1-201ENST00000408494 87 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 RNU2-49P-201ENST00000410666 184 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 RNU6-221P-201ENST00000459541 99 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 AC008885.1-201ENST00000514930 301 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 SNORA40.13-201ENST00000516379 120 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 RNA5SP309-201ENST00000516670 106 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 AC007751.1-201ENST00000529260 376 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 HSPE1P7-201ENST00000604681 321 ntBASIC3.34□□□□□ -1.87
SHKBP1Q8TBC3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SHKBP1Q8TBC3 PWAR6-201ENST00000552334 4618 ntBASIC3.34□□□□□ -1.88
SHKBP1Q8TBC3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 SNORA31-201ENST00000362607 130 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 Y_RNA.66-201ENST00000362862 102 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 RNU4-13P-201ENST00000364019 141 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 Y_RNA.203-201ENST00000364106 102 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 MIR147B-201ENST00000390185 80 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 COTL1P1-201ENST00000422309 375 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 AC245102.2-201ENST00000448956 180 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 AC027419.1-201ENST00000522976 328 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 MIR2681-201ENST00000581814 105 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 AL033523.1-201ENST00000605153 153 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 AC010889.1-201ENST00000566193 2666 ntBASIC3.33□□□□□ -1.88
SHKBP1Q8TBC3 AC010680.1-201ENST00000590024 3590 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 SNORA80A-201ENST00000363922 136 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 RNA5SP173-201ENST00000364857 136 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-1138P-201ENST00000365359 106 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-1014P-201ENST00000383940 103 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 MIR181A2-201ENST00000384863 110 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 MIR562-201ENST00000384894 95 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 RNA5SP136-201ENST00000410906 107 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 EDDM3CP-201ENST00000415977 425 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 AC023449.1-201ENST00000454464 154 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 RN7SL330P-201ENST00000469709 307 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 RN7SKP43-201ENST00000516173 320 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 SNORA64.4-201ENST00000516632 81 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-365P-201ENST00000517113 106 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 AC068657.1-201ENST00000520807 306 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-94P-201ENST00000607728 107 ntBASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SHKBP1Q8TBC3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 Y_RNA.796-201ENST00000364268 102 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 Y_RNA.799-201ENST00000364992 102 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 Y_RNA.486-201ENST00000384398 107 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 MIR300-201ENST00000401138 83 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 AC080013.2-201ENST00000460866 323 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 AC112771.1-201ENST00000463581 102 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 RPL39P34-201ENST00000477141 156 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 RNA5SP281-201ENST00000516504 135 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 RNU7-149P-201ENST00000516739 59 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 AC025647.1-201ENST00000517879 253 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 Pinc.1-201ENST00000616452 154 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 MIR6852-201ENST00000621699 66 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 AL035470.1-201ENST00000622571 220 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 MIR1245B-201ENST00000636115 69 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 U6.98-201ENST00000637157 84 ntBASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHKBP1Q8TBC3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-1209P-201ENST00000363655 107 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 Y_RNA.323-201ENST00000365157 109 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms