Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.56□□□□□ -1.84
RETREG2Q8NC44 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RETREG2Q8NC44 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RETREG2Q8NC44 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RETREG2Q8NC44 RNU6-653P-201ENST00000363074 106 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 SNORD116-13-201ENST00000384408 92 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 SNORA8.3-201ENST00000384679 139 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 AL162725.1-201ENST00000435405 301 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.55□□□□□ -1.84
RETREG2Q8NC44 AC107083.1-201ENST00000439643 279 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 TMSB4XP3-201ENST00000445144 114 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.55□□□□□ -1.84
RETREG2Q8NC44 RNU6-1041P-201ENST00000516254 102 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 RNU7-115P-201ENST00000516433 55 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.55□□□□□ -1.84
RETREG2Q8NC44 AL031274.2-201ENST00000599419 203 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 AC108706.1-201ENST00000611053 297 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 Y_RNA.802-201ENST00000614892 130 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 AC021753.1-201ENST00000635724 168 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 AC132825.6-201ENST00000638861 357 ntBASIC3.55□□□□□ -1.84
RETREG2Q8NC44 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RETREG2Q8NC44 RNU6-417P-201ENST00000384712 107 ntBASIC3.54□□□□□ -1.84
RETREG2Q8NC44 RNU6-394P-201ENST00000410735 107 ntBASIC3.54□□□□□ -1.84
RETREG2Q8NC44 RN7SKP51-201ENST00000410781 304 ntBASIC3.54□□□□□ -1.84
RETREG2Q8NC44 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.54□□□□□ -1.84
RETREG2Q8NC44 AC008885.1-201ENST00000514930 301 ntBASIC3.54□□□□□ -1.84
RETREG2Q8NC44 RNY3P16-201ENST00000516338 101 ntBASIC3.54□□□□□ -1.84
RETREG2Q8NC44 MIR338-201ENST00000636369 67 ntBASIC3.54□□□□□ -1.84
RETREG2Q8NC44 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RETREG2Q8NC44 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 RNA5SP493-201ENST00000364115 91 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 SNORD114-6-201ENST00000364393 72 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 SNORD50.2-201ENST00000365465 70 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 Y_RNA.441-201ENST00000384123 112 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 MIR526A2-201ENST00000390198 65 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 RPL21P3-201ENST00000395517 478 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 SNORA11.4-201ENST00000408823 129 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 CST2P1-201ENST00000425770 87 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 AC022018.1-201ENST00000430685 241 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 RNU6-1219P-201ENST00000516143 112 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 RNU7-99P-201ENST00000516271 62 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 AC127455.1-201ENST00000565496 145 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 UBL5P2-201ENST00000583788 219 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 AC006023.1-201ENST00000603944 259 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 uc_338.25-201ENST00000613756 156 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 AL035425.3-201ENST00000564206 4996 ntBASIC3.53□□□□□ -1.84
RETREG2Q8NC44 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RETREG2Q8NC44 AC134026.1-201ENST00000623249 2239 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 MAPK10-266ENST00000641066 6555 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RETREG2Q8NC44 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RETREG2Q8NC44 RNU1-58P-201ENST00000362413 163 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 RNU6-1048P-201ENST00000364054 107 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 RNU1-96P-201ENST00000364163 162 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 SNORA71.1-201ENST00000364523 117 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 SNORD113-1-201ENST00000365321 69 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 SNORA7.4-201ENST00000384249 137 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 MIR520G-201ENST00000385064 90 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 MIR613-201ENST00000385248 95 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 YWHAEP4-201ENST00000505390 198 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 RNU7-200P-201ENST00000516105 62 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 AC024995.1-201ENST00000523014 93 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 AC015720.1-201ENST00000565251 277 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 MIR3144-201ENST00000579460 79 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 MIR4658-201ENST00000584344 65 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 POLR3GP1-201ENST00000594073 261 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.52□□□□□ -1.85
RETREG2Q8NC44 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
RETREG2Q8NC44 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RETREG2Q8NC44 MIR367-201ENST00000362299 68 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 Y_RNA.172-201ENST00000363765 102 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 MIR562-201ENST00000384894 95 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 RNA5SP323-201ENST00000391094 133 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 EBAG9P1-201ENST00000418955 543 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 RNU1-142P-201ENST00000516682 145 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 AL033523.1-201ENST00000605153 153 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 MIR622-201ENST00000638396 96 ntBASIC3.51□□□□□ -1.85
RETREG2Q8NC44 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RETREG2Q8NC44 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RETREG2Q8NC44 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RETREG2Q8NC44 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
RETREG2Q8NC44 SNORD115-3-201ENST00000363100 82 ntBASIC3.5□□□□□ -1.85
RETREG2Q8NC44 RNU6-1164P-201ENST00000364428 107 ntBASIC3.5□□□□□ -1.85
RETREG2Q8NC44 SNORA72-201ENST00000384339 132 ntBASIC3.5□□□□□ -1.85
RETREG2Q8NC44 SNORD15B-201ENST00000384714 146 ntBASIC3.5□□□□□ -1.85
RETREG2Q8NC44 Y_RNA.571-201ENST00000384753 98 ntBASIC3.5□□□□□ -1.85
RETREG2Q8NC44 SNORA46-201ENST00000384762 135 ntBASIC3.5□□□□□ -1.85
RETREG2Q8NC44 RNU6-1186P-201ENST00000410429 97 ntBASIC3.5□□□□□ -1.85
RETREG2Q8NC44 AC117454.1-201ENST00000491120 168 ntBASIC3.5□□□□□ -1.85
RETREG2Q8NC44 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.5□□□□□ -1.85
RETREG2Q8NC44 HMGB3P3-201ENST00000510526 400 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms