Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCUBE3Q8IX30 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4□□□□□ -1.77
SCUBE3Q8IX30 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4□□□□□ -1.77
SCUBE3Q8IX30 AP001486.2-201ENST00000561652 5113 ntBASIC4□□□□□ -1.77
SCUBE3Q8IX30 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4□□□□□ -1.77
SCUBE3Q8IX30 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCUBE3Q8IX30 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCUBE3Q8IX30 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCUBE3Q8IX30 MIR548O-201ENST00000408583 114 ntBASIC4□□□□□ -1.77
SCUBE3Q8IX30 UBE2Q2P12-201ENST00000414573 204 ntBASIC4□□□□□ -1.77
SCUBE3Q8IX30 AL139247.1-201ENST00000422768 325 ntBASIC4□□□□□ -1.77
SCUBE3Q8IX30 FTH1P12-201ENST00000432137 551 ntBASIC4□□□□□ -1.77
SCUBE3Q8IX30 RNA5SP208-201ENST00000516156 78 ntBASIC4□□□□□ -1.77
SCUBE3Q8IX30 MIR4644-201ENST00000579929 84 ntBASIC4□□□□□ -1.77
SCUBE3Q8IX30 MIR1248-201ENST00000629190 106 ntBASIC4□□□□□ -1.77
SCUBE3Q8IX30 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 SNORA33-201ENST00000363664 130 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 MIR802-201ENST00000390235 94 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 HSPE1P26-201ENST00000405341 275 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 RNA5SP38-201ENST00000410750 119 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 SNORA57.3-201ENST00000411095 141 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 Z92545.1-201ENST00000411782 234 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 TRBV12-2-201ENST00000489763 344 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 AC091826.1-201ENST00000514065 313 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 RNU7-61P-201ENST00000515897 61 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 RNA5SP164-201ENST00000516533 110 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 AL358944.1-201ENST00000528537 144 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 MIR4778-201ENST00000577635 80 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 MIR3683-201ENST00000580847 82 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 AL137849.1-201ENST00000604767 169 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 SNORA62.6-201ENST00000606322 83 ntBASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.99□□□□□ -1.77
SCUBE3Q8IX30 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 SNORD115-28-201ENST00000363931 81 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 RNU6-1296P-201ENST00000383879 107 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 RNU6-644P-201ENST00000391155 98 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 AL451046.2-201ENST00000403074 277 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 AC096949.1-201ENST00000412047 152 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 HMGN2P34-201ENST00000437647 269 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 AC010401.1-201ENST00000463867 348 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 RNU6-965P-201ENST00000516721 96 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 U7.3-201ENST00000616123 62 ntBASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCUBE3Q8IX30 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 Y_RNA.37-201ENST00000362606 108 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 RNU6-787P-201ENST00000384032 107 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 Y_RNA.507-201ENST00000384500 99 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 RNU6-279P-201ENST00000391297 101 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 RNU6-341P-201ENST00000516973 96 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 AC087499.8-201ENST00000578406 226 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 MIR5195-201ENST00000583555 115 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 AC006441.5-201ENST00000612680 209 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 MAPK10-372ENST00000641954 3413 ntBASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.97□□□□□ -1.77
SCUBE3Q8IX30 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SCUBE3Q8IX30 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
SCUBE3Q8IX30 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 Y_RNA.73-201ENST00000362910 113 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 Y_RNA.267-201ENST00000364679 109 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 Y_RNA.531-201ENST00000384589 121 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 MIR522-201ENST00000385071 87 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 RNA5SP252-201ENST00000391131 119 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 AL353689.1-201ENST00000438895 199 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 RNU2-35P-201ENST00000516446 142 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 RNU6-856P-201ENST00000516959 98 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 AC091544.4-201ENST00000555268 342 ntBASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCUBE3Q8IX30 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 AC080128.1-201ENST00000474389 1917 ntBASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCUBE3Q8IX30 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms