Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL365361.1-201ENST00000566942 3481 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 FAM35DP-201ENST00000323387 2712 ntBASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.45□□□□□ -1.86
NPAS4Q8IUM7 AC131280.1-202ENST00000624067 4211 ntBASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 RNU6-1205P-201ENST00000363625 106 ntBASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 RPS26P55-201ENST00000471178 356 ntBASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 AC018868.1-201ENST00000491307 315 ntBASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 uc_338.25-201ENST00000613756 156 ntBASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPAS4Q8IUM7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 RNY1P11-201ENST00000363759 113 ntBASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 RNU6-160P-201ENST00000384591 107 ntBASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 MIR15B-201ENST00000385045 98 ntBASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 RNU11-5P-201ENST00000391216 129 ntBASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 AL355796.1-201ENST00000406706 323 ntBASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 RPPH1-2P-201ENST00000516688 293 ntBASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 CENPCP1-201ENST00000533085 2578 ntBASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS4Q8IUM7 MIR423-201ENST00000362201 94 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 Y_RNA.229-201ENST00000364347 113 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 RNU6-643P-201ENST00000384018 107 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 Y_RNA.525-201ENST00000384570 113 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 RNU6-768P-201ENST00000384683 107 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 MIR526A2-201ENST00000390198 65 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 SNORA26.7-201ENST00000391288 122 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 AL606845.1-201ENST00000404881 255 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 RNU7-26P-201ENST00000458980 63 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 RPS27P22-201ENST00000478056 241 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 RNA5SP20-201ENST00000515976 84 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 RNU6-659P-201ENST00000516454 104 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 AL391903.3-201ENST00000612158 163 ntBASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPAS4Q8IUM7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 SNORA5B-201ENST00000363786 132 ntBASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 SNORA71.1-201ENST00000364523 117 ntBASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 SNORA54-201ENST00000384281 123 ntBASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 CST9LP2-201ENST00000437612 320 ntBASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 RNU2-56P-201ENST00000516826 190 ntBASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 AC027419.1-201ENST00000522976 328 ntBASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 MIR6844-201ENST00000637122 62 ntBASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPAS4Q8IUM7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NPAS4Q8IUM7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
NPAS4Q8IUM7 SNORA63.4-201ENST00000362763 126 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 SNORD15B-201ENST00000384714 146 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 MIR518C-201ENST00000384822 101 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 RNU6-588P-201ENST00000410281 105 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 RNU6-383P-201ENST00000410864 94 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 RN7SKP284-201ENST00000411002 343 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 CYCSP49-201ENST00000420810 319 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 HSPE1P21-201ENST00000438283 308 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 RNU7-107P-201ENST00000459121 61 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 RPS29P21-201ENST00000496272 170 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 AC012640.5-201ENST00000623897 319 ntBASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPAS4Q8IUM7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 Y_RNA.124-201ENST00000363339 93 ntBASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 RNU6-1056P-201ENST00000383996 107 ntBASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 RNU6-1337P-201ENST00000516525 95 ntBASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 AC007536.1-201ENST00000533382 349 ntBASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 MIR4724-201ENST00000579485 89 ntBASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.39□□□□□ -1.87
NPAS4Q8IUM7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 RNU6-834P-201ENST00000362367 110 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 U8.7-201ENST00000364940 136 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 Y_RNA.521-201ENST00000384560 114 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 RNU6-429P-201ENST00000384582 108 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 RNU6-1228P-201ENST00000391014 107 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms