Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 Y_RNA.93-201ENST00000363066 109 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 Y_RNA.253-201ENST00000364562 112 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 RNU6-690P-201ENST00000365242 106 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 RNA5SP252-201ENST00000391131 119 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 HSPE1P26-201ENST00000405341 275 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 RNU2-37P-201ENST00000410695 177 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 AC025750.2-201ENST00000442609 450 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 PRSS3P4-201ENST00000453323 162 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 SNORA31.21-201ENST00000517180 77 ntBASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 RPL23AP83-201ENST00000434984 473 ntBASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 RN7SKP18-201ENST00000516005 275 ntBASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 MIR4738-201ENST00000579134 87 ntBASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 AC012314.7-201ENST00000619693 93 ntBASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.63□□□□□ -1.83
LYSMD3Q7Z3D4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 RNU6-349P-201ENST00000362402 107 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 SNORD9-201ENST00000362566 104 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 Y_RNA.107-201ENST00000363190 121 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 SNORA63D-201ENST00000364359 132 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 Y_RNA.265-201ENST00000364677 108 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 AC093578.1-201ENST00000415219 368 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 HMGN2P18-201ENST00000450680 270 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 AC104619.4-201ENST00000510773 249 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 AC073413.2-201ENST00000604332 360 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 AC021443.1-201ENST00000604478 211 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
LYSMD3Q7Z3D4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 Y_RNA.298-201ENST00000364960 107 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 MIR548D2-201ENST00000384955 97 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 MIR34B-201ENST00000385076 84 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 AC233266.1-201ENST00000454518 96 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 RNA5SP112-201ENST00000515937 99 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 SNORA70.18-201ENST00000516696 98 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 RNU6-965P-201ENST00000516721 96 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 SUMO2P16-201ENST00000519475 264 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 MIR3186-201ENST00000577404 85 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 MIR4425-201ENST00000580572 84 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 U3.45-201ENST00000607547 219 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 AC242852.1-201ENST00000612151 96 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 AC244015.1-201ENST00000622301 99 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 MIR1248-201ENST00000629190 106 ntBASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LYSMD3Q7Z3D4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 RNA5SP72-201ENST00000364442 117 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 MIR1253-201ENST00000408273 105 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 Y_RNA.593-201ENST00000410292 98 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 RPS29P4-201ENST00000414733 161 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 AC017083.1-201ENST00000428093 483 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 SNORD105B-201ENST00000458770 79 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 RNU6-893P-201ENST00000458841 100 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 AC106707.2-201ENST00000484182 374 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 MRPS36P2-201ENST00000512569 299 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 RNU6-586P-201ENST00000517265 104 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 AC004486.1-201ENST00000546846 233 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 U2.20-201ENST00000613956 192 ntBASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LYSMD3Q7Z3D4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 AL049781.1-201ENST00000623195 3585 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms