| ATG9A | Q7Z3C6 | AC012493.3-201 | ENST00000604494 | 112 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| ATG9A | Q7Z3C6 | AL645939.4-201 | ENST00000604495 | 135 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| ATG9A | Q7Z3C6 | AC010205.1-201 | ENST00000616668 | 449 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| ATG9A | Q7Z3C6 | U6.92-201 | ENST00000636464 | 89 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| ATG9A | Q7Z3C6 | ANKRD36-208 | ENST00000639751 | 3090 nt | TSL 5 BASIC | 1.97 | □□□□□ -2.09 | | |
| ATG9A | Q7Z3C6 | SKIL-202 | ENST00000413427 | 2702 nt | TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | SNORD115-3-201 | ENST00000363100 | 82 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.152-201 | ENST00000363578 | 100 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | SNORD87-201 | ENST00000364849 | 89 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.389-201 | ENST00000383924 | 113 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | HMGN2P39-201 | ENST00000398005 | 273 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR1185-2-201 | ENST00000408687 | 86 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AL390729.2-201 | ENST00000416137 | 156 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RPL31P63-201 | ENST00000422565 | 375 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Z68323.1-201 | ENST00000450365 | 519 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-221P-201 | ENST00000459541 | 99 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-856P-201 | ENST00000516959 | 98 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR4659A-201 | ENST00000580269 | 81 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RBMS2-209 | ENST00000639027 | 192 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 1.96 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC091812.1-201 | ENST00000432235 | 1948 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNA5SP276-201 | ENST00000362580 | 94 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.230-201 | ENST00000364348 | 109 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | SNORA72.2-201 | ENST00000365028 | 127 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-418P-201 | ENST00000384035 | 107 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.439-201 | ENST00000384119 | 94 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR518A2-201 | ENST00000384966 | 87 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR548B-201 | ENST00000385247 | 97 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR1323-201 | ENST00000408090 | 73 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-57P-201 | ENST00000411348 | 103 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | SRP72-202 | ENST00000504757 | 745 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-1053P-201 | ENST00000515930 | 101 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | SUMO2P18-201 | ENST00000518873 | 252 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AP003128.1-201 | ENST00000531414 | 448 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AP003072.1-201 | ENST00000531740 | 145 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | snoU13.31-201 | ENST00000607291 | 104 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AL357054.2-201 | ENST00000607644 | 423 nt | TSL 5 BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC240442.1-201 | ENST00000616055 | 283 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR3674-201 | ENST00000636576 | 68 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | SYT14-201 | ENST00000367015 | 5094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.95 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MUC15-202 | ENST00000436318 | 3118 nt | TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-1164P-201 | ENST00000364428 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-926P-201 | ENST00000384075 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC096920.1-201 | ENST00000423991 | 241 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RAB28P5-201 | ENST00000427490 | 651 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | LINC00448-201 | ENST00000438352 | 402 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-408P-201 | ENST00000515910 | 100 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | NKAIN2-205 | ENST00000546092 | 148 nt | TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC126177.2-201 | ENST00000552154 | 452 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | LINC01919-202 | ENST00000579506 | 384 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | ST7-AS1_1.1-201 | ENST00000611142 | 116 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | U1.36-201 | ENST00000620684 | 176 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | CGGBP1-202 | ENST00000398392 | 5298 nt | APPRIS P1 BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AL159152.1-201 | ENST00000635019 | 2587 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU4-13P-201 | ENST00000364019 | 141 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNA5SP493-201 | ENST00000364115 | 91 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-60P-201 | ENST00000364792 | 103 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.326-201 | ENST00000365176 | 113 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.455-201 | ENST00000384230 | 98 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.485-201 | ENST00000384395 | 102 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR1253-201 | ENST00000408273 | 105 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR1252-201 | ENST00000408861 | 65 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU5A-5P-201 | ENST00000411054 | 116 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | ELOCP21-201 | ENST00000412558 | 336 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AP1B1P2-201 | ENST00000416196 | 106 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AL590422.1-201 | ENST00000451829 | 364 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | LINC02540-201 | ENST00000455554 | 570 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.715-201 | ENST00000517082 | 110 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AK6P2-201 | ENST00000549020 | 471 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC112481.1-201 | ENST00000549669 | 901 nt | TSL 2 BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC005786.1-201 | ENST00000588553 | 154 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC005176.2-201 | ENST00000596933 | 147 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC006380.1-201 | ENST00000603598 | 186 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC022202.1-201 | ENST00000613515 | 211 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AL357075.2-201 | ENST00000614906 | 189 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC006435.5-201 | ENST00000624486 | 112 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.93 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-1240P-201 | ENST00000365155 | 104 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.462-201 | ENST00000384268 | 102 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR515-2-201 | ENST00000384883 | 83 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MIR515-1-201 | ENST00000384884 | 83 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU6-823P-201 | ENST00000391042 | 103 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC078851.1-201 | ENST00000415918 | 298 nt | TSL 3 BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | MTND2P29-201 | ENST00000438595 | 412 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC016717.1-201 | ENST00000448918 | 286 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | ATP5J2P3-201 | ENST00000451550 | 258 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC010469.2-201 | ENST00000496412 | 480 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AP001001.1-201 | ENST00000532422 | 826 nt | TSL 3 BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AL355297.3-201 | ENST00000604082 | 446 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AC040896.1-201 | ENST00000613819 | 479 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | AL590240.4-201 | ENST00000616908 | 390 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | CYSLTR1-201 | ENST00000373304 | 2576 nt | APPRIS P1 TSL 1 (best) BASIC | 1.91 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU1-42P-201 | ENST00000364033 | 160 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.216-201 | ENST00000364205 | 93 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.458-201 | ENST00000384240 | 102 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU11-3P-201 | ENST00000391111 | 133 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| ATG9A | Q7Z3C6 | Y_RNA.645-201 | ENST00000391229 | 102 nt | BASIC | 1.91 | □□□□□ -2.1 | | |