Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 RNU6-221P-201ENST00000459541 99 ntBASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 COX6CP14-201ENST00000469580 174 ntBASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 AC234781.5-201ENST00000508429 271 ntBASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 SNORD116-28-201ENST00000516123 91 ntBASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 AC024405.2-202ENST00000532731 184 ntBASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 MIR4282-201ENST00000583613 67 ntBASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
OTOP1Q7RTM1 AC009487.4-201ENST00000624969 3585 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 MIR411-201ENST00000362239 96 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 RNA5SP125-201ENST00000364843 120 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 RNU6-855P-201ENST00000410395 104 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 RPS12P2-201ENST00000439728 269 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 Y_RNA.644-201ENST00000459006 113 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 RNU6-498P-201ENST00000459468 107 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 SNORA4.4-201ENST00000515921 135 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 RNA5SP76-201ENST00000516277 87 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 Y_RNA.674-201ENST00000516362 113 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 RNU2-34P-201ENST00000516534 121 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 AP005660.1-201ENST00000522972 293 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 Z83818.1-201ENST00000603584 150 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 AC098479.1-201ENST00000609225 154 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 snoU18.1-201ENST00000629629 71 ntBASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
OTOP1Q7RTM1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 RNU6-271P-201ENST00000363858 105 ntBASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 RNY4P28-201ENST00000365281 93 ntBASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 Y_RNA.341-201ENST00000365341 102 ntBASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 RNU6-667P-201ENST00000517186 102 ntBASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
OTOP1Q7RTM1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 RNU6-1272P-201ENST00000362776 107 ntBASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 RNU6-211P-201ENST00000384047 107 ntBASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 RNA5SP210-201ENST00000391034 120 ntBASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 AL359511.1-201ENST00000402970 211 ntBASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 AC010598.1-201ENST00000510378 103 ntBASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 RNA5SP281-201ENST00000516504 135 ntBASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
OTOP1Q7RTM1 Y_RNA.262-201ENST00000364641 102 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 RNU6-407P-201ENST00000365280 104 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 RNU6-209P-201ENST00000384118 107 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 MIR873-201ENST00000401120 77 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 AC123900.1-201ENST00000420390 96 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 AC009238.1-201ENST00000442165 424 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 AC009237.6-201ENST00000446969 424 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 SNORD2.1-201ENST00000458762 69 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 AC093259.1-201ENST00000509755 300 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 AC136628.3-201ENST00000521868 290 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 AC027419.1-201ENST00000522976 328 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 PRELID2P1-201ENST00000552837 301 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 AC090616.3-201ENST00000582184 217 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 AC004792.1-201ENST00000614523 137 ntBASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
OTOP1Q7RTM1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 RNU6-1020P-201ENST00000363684 107 ntBASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 Y_RNA.270-201ENST00000364693 104 ntBASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 Y_RNA.287-201ENST00000364853 94 ntBASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 RNU6-1240P-201ENST00000365155 104 ntBASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 SNORA20B-201ENST00000384220 132 ntBASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 SNORD65B-201ENST00000459126 73 ntBASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 AP002392.1-201ENST00000537692 208 ntBASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.84□□□□□ -1.95
OTOP1Q7RTM1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 SNORD114-7-201ENST00000362520 77 ntBASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 Y_RNA.140-201ENST00000363474 103 ntBASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 Y_RNA.308-201ENST00000365043 101 ntBASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 SNORA25B-201ENST00000365507 128 ntBASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 Y_RNA.456-201ENST00000384232 111 ntBASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 RNU6-763P-201ENST00000390865 106 ntBASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 MIR1253-201ENST00000408273 105 ntBASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 AC010154.1-201ENST00000425857 269 ntBASIC2.83□□□□□ -1.96
OTOP1Q7RTM1 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms