Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SNORA71B-202ENST00000439232 272 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 RNU1-131P-201ENST00000458943 161 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 AC093259.1-201ENST00000509755 300 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 MIR4778-201ENST00000577635 80 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 AC022217.4-201ENST00000604389 163 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 AC006441.5-201ENST00000612680 209 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 MIR3202-2-201ENST00000635980 79 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 AC080128.1-201ENST00000474389 1917 ntBASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCRAQ6ISU1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 RNU4-35P-201ENST00000362588 141 ntBASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 RNA5SP374-201ENST00000362939 125 ntBASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 RNU1-133P-201ENST00000364867 167 ntBASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 RNU6-546P-201ENST00000383991 107 ntBASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 HLA-N-201ENST00000437516 135 ntBASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 HMGN2P34-201ENST00000437647 269 ntBASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 MIR3683-201ENST00000580847 82 ntBASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 AL162274.2-201ENST00000614406 332 ntBASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCRAQ6ISU1 AC093908.1-201ENST00000623125 8092 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 RNY3P2-201ENST00000362918 102 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 RNU1-72P-201ENST00000362976 153 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 Y_RNA.332-201ENST00000365271 113 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 MIR548O-201ENST00000408583 114 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 MIR1183-201ENST00000408856 89 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 Y_RNA.601-201ENST00000410500 113 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 VWA8P1-201ENST00000510889 176 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 PHBP14-201ENST00000512887 367 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 RNU6-1291P-201ENST00000516591 104 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 RNU6-965P-201ENST00000516721 96 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 AC091544.4-201ENST00000555268 342 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 MIR6079-201ENST00000635807 62 ntBASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.81□□□□□ -1.8
PTCRAQ6ISU1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 Y_RNA.17-201ENST00000362433 111 ntBASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 SNORD115-28-201ENST00000363931 81 ntBASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 MIR522-201ENST00000385071 87 ntBASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 MIR513A2-201ENST00000385249 127 ntBASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 S100A11P2-201ENST00000467589 312 ntBASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 RN7SL504P-201ENST00000494496 287 ntBASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 MIR4305-201ENST00000583252 102 ntBASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PTCRAQ6ISU1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 RNU6-442P-201ENST00000383968 104 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 RNU6-1104P-201ENST00000384723 104 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 RNU6-816P-201ENST00000390914 107 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 RNU6-1268P-201ENST00000391214 107 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 RNU6-1239P-201ENST00000391310 107 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 AC060773.1-201ENST00000421698 310 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 AL031183.1-201ENST00000457667 207 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 RNU7-80P-201ENST00000459562 61 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 AC010401.1-201ENST00000463867 348 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 SNRPGP3-201ENST00000469405 227 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 RNU7-123P-201ENST00000515911 60 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 MIR5680-201ENST00000577577 84 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 AP000553.6-201ENST00000641242 118 ntBASIC3.79□□□□□ -1.8
PTCRAQ6ISU1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 Y_RNA.37-201ENST00000362606 108 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 snoU2-30.2-201ENST00000362805 70 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 SNORA80A-201ENST00000363922 136 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 RNU6-1124P-201ENST00000384169 107 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 RNA5SP424-201ENST00000390988 115 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 RPL23AP48-201ENST00000406913 488 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 Y_RNA.593-201ENST00000410292 98 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.78□□□□□ -1.8
PTCRAQ6ISU1 AL445687.1-201ENST00000439946 251 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms