Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 RNU6-1305P-201ENST00000364353 104 ntBASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 RNY3P5-201ENST00000384127 102 ntBASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 MIR4319-201ENST00000577285 85 ntBASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 MIR378D2-201ENST00000580636 98 ntBASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 AC105245.1-201ENST00000581934 244 ntBASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 AL670379.3-201ENST00000605040 251 ntBASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 U7.8-201ENST00000619968 63 ntBASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSB-PGBD3P0DP91 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CSB-PGBD3P0DP91 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CSB-PGBD3P0DP91 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.09□□□□□ -1.76
CSB-PGBD3P0DP91 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 SNORA20B-201ENST00000384220 132 ntBASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 SCGB1D5P-201ENST00000515134 247 ntBASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 RN7SKP132-201ENST00000516001 208 ntBASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 AC093331.1-201ENST00000521474 169 ntBASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 AC133485.4-201ENST00000561835 220 ntBASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 AC138907.4-201ENST00000570107 226 ntBASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CSB-PGBD3P0DP91 AC008555.8-201ENST00000623602 2168 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 SNORD21-201ENST00000383953 95 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 SNORD116-21-201ENST00000384507 92 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 MIR586-201ENST00000385035 97 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 MLLT10P1-201ENST00000418346 262 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 AC105272.1-201ENST00000438604 198 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 MTCO1P44-201ENST00000441935 243 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 SNORA70.12-201ENST00000516084 153 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 RNU6-1061P-201ENST00000516530 99 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 Y_RNA.692-201ENST00000516627 105 ntBASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSB-PGBD3P0DP91 PWAR6-201ENST00000552334 4618 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 AC080128.1-201ENST00000474389 1917 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 Y_RNA.114-201ENST00000363265 113 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 SNORD116-13-201ENST00000384408 92 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 AL139281.1-201ENST00000422120 335 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 AC245047.4-201ENST00000433189 144 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 RNU7-14P-201ENST00000459331 62 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 Y_RNA.651-201ENST00000459380 103 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 AC090515.1-201ENST00000465295 476 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 Y_RNA.694-201ENST00000516677 117 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 RNU6-844P-201ENST00000517175 102 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 snoZ196.1-201ENST00000625269 89 ntBASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSB-PGBD3P0DP91 MIR450A1-201ENST00000362262 91 ntBASIC4.05□□□□□ -1.76
CSB-PGBD3P0DP91 RNU6-978P-201ENST00000364371 103 ntBASIC4.05□□□□□ -1.76
CSB-PGBD3P0DP91 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.05□□□□□ -1.76
CSB-PGBD3P0DP91 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.05□□□□□ -1.76
CSB-PGBD3P0DP91 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSB-PGBD3P0DP91 AC138915.1-201ENST00000565427 1685 ntBASIC4.05□□□□□ -1.76
CSB-PGBD3P0DP91 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CSB-PGBD3P0DP91 RNU6-508P-201ENST00000363231 103 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 Y_RNA.120-201ENST00000363304 110 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 SNORA51.4-201ENST00000364993 124 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 SNORD58C-201ENST00000365223 64 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 RNU6-234P-201ENST00000365229 104 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 AP002088.1-201ENST00000382740 395 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 Y_RNA.495-201ENST00000384435 112 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 MIR548A3-201ENST00000385297 97 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 Y_RNA.587-201ENST00000391210 103 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 SRIP1-201ENST00000489235 288 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 AP003357.1-201ENST00000604497 148 ntBASIC4.04□□□□□ -1.76
CSB-PGBD3P0DP91 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 MIR300-201ENST00000401138 83 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 RNA5SP184-201ENST00000411071 108 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 AC108938.1-201ENST00000451204 136 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 HMGN2P9-201ENST00000476875 229 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 AC023141.11-201ENST00000508864 202 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 RNU6-1337P-201ENST00000516525 95 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 AC018630.3-201ENST00000542637 96 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 MIR5739-201ENST00000619803 80 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 AC244205.2-202ENST00000635781 342 ntBASIC4.03□□□□□ -1.76
CSB-PGBD3P0DP91 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 MIR518C-201ENST00000384822 101 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 AL355796.1-201ENST00000406706 323 ntBASIC4.02□□□□□ -1.77
CSB-PGBD3P0DP91 SNORA79-201ENST00000408376 140 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms