Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF223E7ERA6 AL442644.1-201ENST00000454390 3105 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RNF223E7ERA6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RNF223E7ERA6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF223E7ERA6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF223E7ERA6 Y_RNA.57-201ENST00000362806 113 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 RNU6-478P-201ENST00000363904 110 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 SNORA40.18-201ENST00000391200 128 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 RNA5SP261-201ENST00000410536 106 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF223E7ERA6 AC025554.1-201ENST00000505641 188 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 AC069240.1-201ENST00000548774 375 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 MIR3944-201ENST00000581277 108 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 AL606490.9-201ENST00000603331 271 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 MAPK10-349ENST00000641767 3661 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 MFSD8-233ENST00000641482 4860 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
RNF223E7ERA6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RNF223E7ERA6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF223E7ERA6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF223E7ERA6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF223E7ERA6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF223E7ERA6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 RNU1-63P-201ENST00000383902 164 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 SNORD96B-201ENST00000386148 79 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 MIR548G-201ENST00000408442 89 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF223E7ERA6 SNORA31.1-201ENST00000515993 133 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 SNORA31.5-201ENST00000516190 133 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF223E7ERA6 AC008739.3-201ENST00000603262 127 ntBASIC3.56□□□□□ -1.84
RNF223E7ERA6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF223E7ERA6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF223E7ERA6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF223E7ERA6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF223E7ERA6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF223E7ERA6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF223E7ERA6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF223E7ERA6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF223E7ERA6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF223E7ERA6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RNF223E7ERA6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF223E7ERA6 MIR208A-201ENST00000362287 71 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 SNORA71.3-201ENST00000362582 128 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 RNU1-83P-201ENST00000363426 164 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 SNORD46.1-201ENST00000364139 104 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 SRIP3-201ENST00000413200 219 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.55□□□□□ -1.84
RNF223E7ERA6 RNU1-98P-201ENST00000458992 160 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 RNU7-181P-201ENST00000517234 74 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 AL513043.2-201ENST00000573941 143 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 RNU6-90P-201ENST00000606352 106 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 AC006111.3-201ENST00000622137 383 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 AC091905.2-201ENST00000623143 306 ntBASIC3.55□□□□□ -1.84
RNF223E7ERA6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RNF223E7ERA6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF223E7ERA6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RNF223E7ERA6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF223E7ERA6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RNF223E7ERA6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF223E7ERA6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF223E7ERA6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF223E7ERA6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF223E7ERA6 AC093831.2-201ENST00000624393 3427 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 MIR34C-201ENST00000384831 77 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 SNORA26.6-201ENST00000391256 115 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 RN7SKP192-201ENST00000411291 327 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF223E7ERA6 S100A11P1-201ENST00000477525 312 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 TRBV12-1-201ENST00000479785 344 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 RN7SL297P-201ENST00000483161 293 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 RNU6-871P-201ENST00000516122 100 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 SNORA25.13-201ENST00000516395 103 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 IFITM8P-201ENST00000522529 394 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF223E7ERA6 MIR5685-201ENST00000579080 79 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 SNORD3E-202ENST00000627253 216 ntBASIC3.54□□□□□ -1.84
RNF223E7ERA6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF223E7ERA6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF223E7ERA6 AC092435.4-201ENST00000623012 4159 ntBASIC3.53□□□□□ -1.84
RNF223E7ERA6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RNF223E7ERA6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF223E7ERA6 SNORA70.7-201ENST00000384159 133 ntBASIC3.53□□□□□ -1.84
RNF223E7ERA6 RNU6-163P-201ENST00000384396 106 ntBASIC3.53□□□□□ -1.84
RNF223E7ERA6 MIR206-201ENST00000384872 86 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms