Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL358944.1-201ENST00000528537 144 ntBASIC3.57□□□□□ -1.84
PCDHGA11Q9Y5H2 MTND5P32-201ENST00000560711 1802 ntBASIC3.57□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR3129-201ENST00000581095 76 ntBASIC3.57□□□□□ -1.84
PCDHGA11Q9Y5H2 AC087685.1-201ENST00000587507 141 ntBASIC3.57□□□□□ -1.84
PCDHGA11Q9Y5H2 AC025166.1-201ENST00000612411 163 ntBASIC3.57□□□□□ -1.84
PCDHGA11Q9Y5H2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 Y_RNA.43-201ENST00000362670 111 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 AL021397.1-201ENST00000451806 248 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 Y_RNA.649-201ENST00000459077 103 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 RN7SL807P-201ENST00000470923 297 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 NDUFA4P2-201ENST00000489989 244 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 MRPS17P9-201ENST00000511924 393 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU1-142P-201ENST00000516682 145 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-341P-201ENST00000516973 96 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 AP000553.6-201ENST00000641242 118 ntBASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHGA11Q9Y5H2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 Y_RNA.253-201ENST00000364562 112 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 SNORD24-201ENST00000383884 75 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-880P-201ENST00000384526 107 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 AC006989.1-201ENST00000427212 131 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 AL353689.1-201ENST00000438895 199 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 AC096725.1-201ENST00000514266 313 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-781P-201ENST00000516377 101 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 RNA5SP170-201ENST00000517150 101 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 AC087499.8-201ENST00000578406 226 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR4425-201ENST00000580572 84 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR6079-201ENST00000635807 62 ntBASIC3.55□□□□□ -1.84
PCDHGA11Q9Y5H2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR340-201ENST00000362125 95 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 Y_RNA.35-201ENST00000362601 101 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-147P-201ENST00000383983 107 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU2-48P-201ENST00000410694 191 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 SNORA57.3-201ENST00000411095 141 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 EDDM3CP-201ENST00000415977 425 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-1291P-201ENST00000516591 104 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR5685-201ENST00000579080 79 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR6810-201ENST00000622701 70 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 AL136360.1-201ENST00000503377 1900 ntBASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA11Q9Y5H2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 Y_RNA.267-201ENST00000364679 109 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 Y_RNA.309-201ENST00000365046 111 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 SNORA12.1-201ENST00000390873 148 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 RN7SKP156-201ENST00000410308 342 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 AC006539.3-201ENST00000454258 129 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 Y_RNA.651-201ENST00000459380 103 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU7-94P-201ENST00000459576 63 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-1041P-201ENST00000516254 102 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-667P-201ENST00000517186 102 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 AC008011.1-201ENST00000545989 227 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR4697-201ENST00000582977 78 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR8058-201ENST00000615737 89 ntBASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PCDHGA11Q9Y5H2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
PCDHGA11Q9Y5H2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-1298P-201ENST00000362456 101 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-888P-201ENST00000363010 101 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-508P-201ENST00000363231 103 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-1164P-201ENST00000364428 107 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 SNORA1-201ENST00000384107 130 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 SNORD61-201ENST00000384252 73 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 MIRLET7F2-201ENST00000385277 83 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 RNA5SP323-201ENST00000391094 133 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 SRIP3-201ENST00000413200 219 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 RNU6-113P-201ENST00000516653 101 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 AC008507.4-201ENST00000585464 127 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 AL353149.1-201ENST00000610667 244 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 AC068724.3-201ENST00000625906 87 ntBASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA11Q9Y5H2 MTND5P18-201ENST00000445624 1801 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR126-201ENST00000362291 85 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR515-2-201ENST00000384883 83 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR515-1-201ENST00000384884 83 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR548A1-201ENST00000385041 97 ntBASIC3.51□□□□□ -1.85
PCDHGA11Q9Y5H2 MIR802-201ENST00000390235 94 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms