Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RNA5SP270-201ENST00000411361 118 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 AC096920.1-201ENST00000423991 241 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
PKP3Q9Y446 RNU6-496P-201ENST00000516145 99 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.18□□□□□ -2.06
PKP3Q9Y446 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.18□□□□□ -2.06
PKP3Q9Y446 AL590240.4-201ENST00000616908 390 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 U6.115-201ENST00000636045 103 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 U6.104-201ENST00000637979 90 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PKP3Q9Y446 AL159152.1-201ENST00000635019 2587 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 snoU2_19.2-201ENST00000363024 80 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 RNU6-23P-201ENST00000363283 107 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 SNORD114-6-201ENST00000364393 72 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 RNU6-1164P-201ENST00000364428 107 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 RNU6-1240P-201ENST00000365155 104 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 Y_RNA.461-201ENST00000384263 103 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 RNU6-102P-201ENST00000384485 104 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 SNORA40.19-201ENST00000390846 128 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 MIR1302-6-201ENST00000408466 90 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 RNA5SP425-201ENST00000410336 112 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 AC016909.1-201ENST00000415916 166 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.17□□□□□ -2.06
PKP3Q9Y446 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.17□□□□□ -2.06
PKP3Q9Y446 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
PKP3Q9Y446 RPL23AP3-201ENST00000453844 468 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 HMGB3P17-201ENST00000504195 649 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PKP3Q9Y446 SCARNA16.3-201ENST00000516595 184 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 RNU6-570P-201ENST00000517051 105 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.17□□□□□ -2.06
PKP3Q9Y446 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.17□□□□□ -2.06
PKP3Q9Y446 7SK.10-201ENST00000621414 298 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 AC064859.1-201ENST00000624741 174 ntBASIC2.17□□□□□ -2.06
PKP3Q9Y446 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PKP3Q9Y446 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
PKP3Q9Y446 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PKP3Q9Y446 AC245060.5-201ENST00000610778 3293 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 RNU6-324P-201ENST00000363957 106 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 RNA5SP493-201ENST00000364115 91 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 Y_RNA.286-201ENST00000364813 102 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 Y_RNA.376-201ENST00000365638 108 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 RNU6-463P-201ENST00000384340 107 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 MIR215-201ENST00000384858 110 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 RNU6-1199P-201ENST00000411249 104 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
PKP3Q9Y446 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.16□□□□□ -2.06
PKP3Q9Y446 SUMO1P2-201ENST00000452524 304 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 RNU6-966P-201ENST00000516479 104 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 AL161670.1-201ENST00000554348 137 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 MIR4513-201ENST00000581077 86 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 AC008749.1-201ENST00000597650 306 ntBASIC2.16□□□□□ -2.06
PKP3Q9Y446 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PKP3Q9Y446 RNU1-58P-201ENST00000362413 163 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 Y_RNA.84-201ENST00000363011 104 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 SNORD81.1-201ENST00000363064 77 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 SNORD115-30-201ENST00000364117 82 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 Y_RNA.243-201ENST00000364481 109 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 RNU6-290P-201ENST00000365212 101 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 Y_RNA.556-201ENST00000384677 113 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 SNORD23.1-201ENST00000408212 104 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 MIR1253-201ENST00000408273 105 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 U3.40-201ENST00000408706 208 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.15□□□□□ -2.07
PKP3Q9Y446 AC060773.1-201ENST00000421698 310 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 POLR2KP2-201ENST00000438155 177 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 AL353689.1-201ENST00000438895 199 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 HSPE1P25-201ENST00000455484 251 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.15□□□□□ -2.07
PKP3Q9Y446 SNORD65B-201ENST00000459126 73 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 TRBVB-201ENST00000477100 408 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 AC010598.1-201ENST00000510378 103 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.15□□□□□ -2.07
PKP3Q9Y446 SDR42E1P4-201ENST00000620894 481 ntBASIC2.15□□□□□ -2.07
PKP3Q9Y446 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PKP3Q9Y446 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PKP3Q9Y446 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PKP3Q9Y446 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 Y_RNA.396-201ENST00000383949 103 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 HMGN2P39-201ENST00000398005 273 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 AL031003.1-201ENST00000404229 172 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 RNU6-1203P-201ENST00000410703 110 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 Z98742.3-201ENST00000418637 326 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 BX510359.4-201ENST00000423750 193 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PKP3Q9Y446 ATP5J2P3-201ENST00000451550 258 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 AC011406.1-201ENST00000512440 370 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 RNU6-1146P-201ENST00000516282 102 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 RNU7-193P-201ENST00000516723 65 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 SUMO2P18-201ENST00000518873 252 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.14□□□□□ -2.07
PKP3Q9Y446 MIR1273D-201ENST00000577266 86 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 MIR3169-201ENST00000578032 83 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 MIR4503-201ENST00000582187 83 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 U4.1-201ENST00000620349 87 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 AC127459.3-201ENST00000624328 466 ntBASIC2.14□□□□□ -2.07
PKP3Q9Y446 RNU6-271P-201ENST00000363858 105 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms