Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.69□□□□□ -1.98
MSL2Q9HCI7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.69□□□□□ -1.98
MSL2Q9HCI7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.69□□□□□ -1.98
MSL2Q9HCI7 UBL5P2-201ENST00000583788 219 ntBASIC2.69□□□□□ -1.98
MSL2Q9HCI7 YPEL5P2-201ENST00000605553 359 ntBASIC2.69□□□□□ -1.98
MSL2Q9HCI7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
MSL2Q9HCI7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.69□□□□□ -1.98
MSL2Q9HCI7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MSL2Q9HCI7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.69□□□□□ -1.98
MSL2Q9HCI7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RNU1-23P-201ENST00000363361 144 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RNY1P11-201ENST00000363759 113 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RNU6-1027P-201ENST00000383998 107 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 Y_RNA.621-201ENST00000411065 96 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 AL135786.1-201ENST00000415892 214 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 HMGN2P18-201ENST00000450680 270 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RPS29P12-201ENST00000460178 152 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RNU6-1333P-201ENST00000516162 93 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RNU2-56P-201ENST00000516826 190 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 RN7SKP57-201ENST00000517248 293 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 SCARNA20.6-201ENST00000517251 106 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 PRELID2P1-201ENST00000552837 301 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 MIR5004-201ENST00000579078 107 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 AC105245.1-201ENST00000581934 244 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 AC073476.4-201ENST00000628409 72 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 MIR6844-201ENST00000637122 62 ntBASIC2.68□□□□□ -1.98
MSL2Q9HCI7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.68□□□□□ -1.98
MSL2Q9HCI7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
MSL2Q9HCI7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MSL2Q9HCI7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MSL2Q9HCI7 RNA5SP374-201ENST00000362939 125 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 SNORD45.3-201ENST00000363836 72 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 Y_RNA.218-201ENST00000364218 104 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 SNORA9-201ENST00000384215 133 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 SNORD15B-201ENST00000384714 146 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.67□□□□□ -1.98
MSL2Q9HCI7 RNU6-221P-201ENST00000459541 99 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 RNA5SP217-201ENST00000515959 91 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 RNU1-143P-201ENST00000516296 146 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 AC127455.1-201ENST00000565496 145 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 AC005972.2-201ENST00000604690 348 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 RPL17P51-201ENST00000605218 238 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 U1.23-201ENST00000610293 146 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 AL391903.3-201ENST00000612158 163 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 RNU1-68P-201ENST00000615382 146 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 U1.39-201ENST00000621562 146 ntBASIC2.67□□□□□ -1.98
MSL2Q9HCI7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
MSL2Q9HCI7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MSL2Q9HCI7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.67□□□□□ -1.98
MSL2Q9HCI7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MSL2Q9HCI7 AC138915.1-201ENST00000565427 1685 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSL2Q9HCI7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSL2Q9HCI7 RNU6-271P-201ENST00000363858 105 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 SNORD31B-201ENST00000364977 69 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 RNU6-376P-201ENST00000384731 106 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 SNORD67-201ENST00000390833 111 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 RPL32P35-201ENST00000415214 394 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 AC016909.1-201ENST00000415916 166 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.66□□□□□ -1.98
MSL2Q9HCI7 HMGN2P34-201ENST00000437647 269 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 RNU6-437P-201ENST00000459408 95 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 AC010598.1-201ENST00000510378 103 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 RNU5E-3P-201ENST00000515913 68 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 RNU6-479P-201ENST00000516348 105 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 AC025647.1-201ENST00000517879 253 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 MIR3117-201ENST00000584034 78 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.66□□□□□ -1.98
MSL2Q9HCI7 AL929325.1-201ENST00000603096 117 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 MIR8057-201ENST00000620957 69 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 AC093831.2-201ENST00000624393 3427 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSL2Q9HCI7 AC080128.1-201ENST00000474389 1917 ntBASIC2.66□□□□□ -1.98
MSL2Q9HCI7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSL2Q9HCI7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
MSL2Q9HCI7 RNA5SP139-201ENST00000364340 117 ntBASIC2.65□□□□□ -1.99
MSL2Q9HCI7 RNU6-546P-201ENST00000383991 107 ntBASIC2.65□□□□□ -1.99
MSL2Q9HCI7 SNORA7.4-201ENST00000384249 137 ntBASIC2.65□□□□□ -1.99
MSL2Q9HCI7 Y_RNA.525-201ENST00000384570 113 ntBASIC2.65□□□□□ -1.99
MSL2Q9HCI7 RNU6-1168P-201ENST00000390831 104 ntBASIC2.65□□□□□ -1.99
MSL2Q9HCI7 MIR1253-201ENST00000408273 105 ntBASIC2.65□□□□□ -1.99
MSL2Q9HCI7 RPL23AP58-201ENST00000440453 469 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms