Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.06□□□□□ -1.76
PHOX2BQ99453 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PHOX2BQ99453 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PHOX2BQ99453 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.06□□□□□ -1.76
PHOX2BQ99453 SNORD6-201ENST00000365444 73 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 Y_RNA.549-201ENST00000384657 102 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 MIR561-201ENST00000385216 97 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 RN7SL601P-201ENST00000471221 293 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.06□□□□□ -1.76
PHOX2BQ99453 RNU6-991P-201ENST00000516168 107 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 RNU7-70P-201ENST00000516941 66 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 IGKV3-31-201ENST00000523109 329 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 AC244505.7-201ENST00000599675 272 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 MIR6868-201ENST00000611215 58 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHOX2BQ99453 AC027290.2-201ENST00000623210 18662 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 MAPK10-253ENST00000641010 4072 ntBASIC4.06□□□□□ -1.76
PHOX2BQ99453 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHOX2BQ99453 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
PHOX2BQ99453 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHOX2BQ99453 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHOX2BQ99453 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHOX2BQ99453 SNORD73B-201ENST00000364394 72 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 Y_RNA.267-201ENST00000364679 109 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 RNU6-1189P-201ENST00000383958 107 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 MIR548A2-201ENST00000384956 97 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 MIR518F-201ENST00000384973 87 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 HMGN2P32-201ENST00000444648 269 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 SCGB1D5P-201ENST00000515134 247 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 AC004486.1-201ENST00000546846 233 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 uc_338.32-201ENST00000615087 172 ntBASIC4.05□□□□□ -1.76
PHOX2BQ99453 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHOX2BQ99453 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PHOX2BQ99453 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.05□□□□□ -1.76
PHOX2BQ99453 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PHOX2BQ99453 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
PHOX2BQ99453 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PHOX2BQ99453 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PHOX2BQ99453 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHOX2BQ99453 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHOX2BQ99453 SNORA63.5-201ENST00000363548 123 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 RNU6-640P-201ENST00000363693 105 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 RNU6-442P-201ENST00000383968 104 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 RPL23AP46-201ENST00000438548 490 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 AL049830.1-201ENST00000468034 425 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 AC025518.1-201ENST00000479856 347 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.04□□□□□ -1.76
PHOX2BQ99453 RNU7-128P-201ENST00000517247 62 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 AC024995.1-201ENST00000523014 93 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 AC091544.4-201ENST00000555268 342 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 AC006386.2-201ENST00000624491 75 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 AC012005.1-201ENST00000624575 75 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 MIR2052-201ENST00000636055 55 ntBASIC4.04□□□□□ -1.76
PHOX2BQ99453 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHOX2BQ99453 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PHOX2BQ99453 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHOX2BQ99453 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHOX2BQ99453 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PHOX2BQ99453 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PHOX2BQ99453 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.03□□□□□ -1.76
PHOX2BQ99453 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PHOX2BQ99453 RNU1-15P-201ENST00000353977 144 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 RNU6-690P-201ENST00000365242 106 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 MIR522-201ENST00000385071 87 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 MIR181B1-201ENST00000385240 110 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PHOX2BQ99453 AL590004.2-201ENST00000404787 371 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 RNA5SP120-201ENST00000410900 112 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 RNU6-1328P-201ENST00000410938 106 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 RPS3AP1-201ENST00000413190 320 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 RPS29P19-201ENST00000479709 171 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 MIR4778-201ENST00000577635 80 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 AC006441.5-201ENST00000612680 209 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 Y_RNA.818-201ENST00000618813 71 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.03□□□□□ -1.76
PHOX2BQ99453 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
PHOX2BQ99453 ZNF720P1-201ENST00000562403 1939 ntBASIC4.03□□□□□ -1.76
PHOX2BQ99453 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PHOX2BQ99453 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PHOX2BQ99453 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PHOX2BQ99453 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PHOX2BQ99453 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PHOX2BQ99453 Y_RNA.78-201ENST00000362970 110 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 SNORD14E-201ENST00000364009 85 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 SNORA68.1-201ENST00000364537 132 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 SNORA2.2-201ENST00000365473 135 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 MIR3074-201ENST00000384885 81 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 RNA5SP323-201ENST00000391094 133 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 AL117342.1-201ENST00000404861 406 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 AC006011.1-201ENST00000442758 349 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 RN7SL636P-201ENST00000497504 294 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 RNU6-240P-201ENST00000516098 97 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.02□□□□□ -1.77
PHOX2BQ99453 MIR338-201ENST00000636369 67 ntBASIC4.02□□□□□ -1.77
PHOX2BQ99453 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PHOX2BQ99453 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PHOX2BQ99453 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PHOX2BQ99453 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms