Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 U4.1-201ENST00000620349 87 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 U6.104-201ENST00000637979 90 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 AP006437.1-201ENST00000641440 3685 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 RNU4-90P-201ENST00000362773 141 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 RNU6-1266P-201ENST00000362794 105 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 SNORD114-6-201ENST00000364393 72 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 RNU6-160P-201ENST00000384591 107 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 MT-TW-201ENST00000387382 68 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 U3.40-201ENST00000408706 208 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 RNU6-1199P-201ENST00000411249 104 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 HSPE1P25-201ENST00000455484 251 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 TRBVB-201ENST00000477100 408 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 MIR3149-201ENST00000584629 83 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 AC008749.1-201ENST00000597650 306 ntBASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDK5RAP3Q96JB5 RNU4-82P-201ENST00000362443 140 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 RNU6-324P-201ENST00000363957 106 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.483-201ENST00000384380 101 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.541-201ENST00000384640 113 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 RNU6-1203P-201ENST00000410703 110 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 RN7SKP284-201ENST00000411002 343 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 AC008134.1-201ENST00000420943 193 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 RNU6-856P-201ENST00000516959 98 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 AL590240.4-201ENST00000616908 390 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 U6.115-201ENST00000636045 103 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.452-201ENST00000384202 108 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-472P-201ENST00000384299 107 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.556-201ENST00000384677 113 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 SNORA67.4-201ENST00000384688 142 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 POLR2KP2-201ENST00000438155 177 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 UBE2DNL-203ENST00000474922 222 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 AC078899.2-201ENST00000595282 212 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 SDR42E1P4-201ENST00000620894 481 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 AL159152.1-201ENST00000635019 2587 ntBASIC2.52□□□□□ -2.01
CDK5RAP3Q96JB5 MIR449A-201ENST00000362113 91 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.16-201ENST00000362421 102 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 SNORD81.1-201ENST00000363064 77 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 SNORD115-30-201ENST00000364117 82 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-1164P-201ENST00000364428 107 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.243-201ENST00000364481 109 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-1240P-201ENST00000365155 104 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-290P-201ENST00000365212 101 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 MIR518A2-201ENST00000384966 87 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 MIR221-201ENST00000385135 110 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 AC016909.1-201ENST00000415916 166 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 AC060773.1-201ENST00000421698 310 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 SNORD65B-201ENST00000459126 73 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 RPS27P21-201ENST00000486977 252 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 AC027419.1-201ENST00000522976 328 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 MIR6132-201ENST00000622083 109 ntBASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDK5RAP3Q96JB5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-702P-201ENST00000364982 107 ntBASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.383-201ENST00000383855 97 ntBASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 MIR29C-201ENST00000385231 88 ntBASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 AC018634.1-201ENST00000437554 401 ntBASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 RNU1-131P-201ENST00000458943 161 ntBASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 DEFB108E-201ENST00000524692 240 ntBASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 MIR3684-201ENST00000579779 74 ntBASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 SNORD53-201ENST00000579969 78 ntBASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.5□□□□□ -2.01
CDK5RAP3Q96JB5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-23P-201ENST00000363283 107 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.193-201ENST00000363979 102 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 RNA5SP493-201ENST00000364115 91 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.288-201ENST00000364854 92 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.329-201ENST00000365209 107 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 SNORA20B-201ENST00000384220 132 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 Y_RNA.569-201ENST00000384749 103 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 AL031003.1-201ENST00000404229 172 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 AL355796.1-201ENST00000406706 323 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 MIR1253-201ENST00000408273 105 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 MRPS10P1-201ENST00000448483 130 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 RNU6-436P-201ENST00000516171 114 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 AP001282.2-201ENST00000616149 309 ntBASIC2.49□□□□□ -2.01
CDK5RAP3Q96JB5 AC009831.4-201ENST00000620744 325 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms